| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0498 |
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| Symbol | |
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| ID | 5108417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 535258 |
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| End bp | 536208 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501711 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001186000 |
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| Protein GI | 146305535 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CCTTCGCCTT CCTGCTGCTT CCCGGTTTTT CGATGATAGG CCTGATGTCG
GCCATCGAGC CGCTGCGCGT GGCCAACCGC TTTCGCGGCG AGCTGTACCG CTGGCGCCTG
CTCAGCCTGG ACAGCGAGGC GGTGGCGGCG AGCAACGGCA TGTCGCTCAA CGTCGAGGCC
GGGCTGGAGC TGCCGGAGGA CACCCAGGCG CTGTTCGTGG TCGCCGGTTT CGAGCCCCTG
GCGCATTACG ACAAGCGCCT GGCGCATTGG CTGCAACGCC GCGAACGCGA GGTGAAGGTG
CTCGGTGCCA TCGACACCGG CAGCTTCGTG CTGGCCGAGG CCGGGCTGTT CGAGCAGCAG
CGCCTGACCC TGCACTGGGA GGCGATCGAC GCCTTCTGCG AGCGCTATCC GCAGCTGCAG
GTAACCCAGG AGCTGTTCGA GATCGATGGC CGGCGCATCA CCAGCGCCGG CGGCACCAGC
AGCCTCGACC TGATGCTCGG GCTGATCGGC CGGGATCACG GCGAACCGCT GGCGGTGCAG
GTCTCCGAGC AGTTCGTGCT CGGTCGCATC CGCACCCGCC AGGACCACCA GCGCATGCAG
ATCGCCAGCC GCTACGACCT GCACAACAAG AAACTGGTAC GGGTGATCGG CGAGATGGAG
CGCCACTGCG ATCAGCCACT GCCCTGCGAG GAGCTGGCCG AGCAGGTCGG GGTCAGCGTG
CGCCAGCTGG AGCGACTGTT CCGCCATCAC CTGAACACCA CACCCTCGGC CTTCTACCTC
GGCTTGCGCC TGGACAAGGC GCGCCAGCTG CTGCGCCAGA GCGATCTGAG CGTGCTGGAG
GTGGGCCTGG CCTGCGGCTT CGACTCGGCG TCGTATTTCT CGCGCTGCTA CCGCCAGCAC
TTCGCCGCCA GCCCCAGCCA GGATCGTCAC GAGCGGCCGG CACCCAGCTA A
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| Protein sequence | MTQTFAFLLL PGFSMIGLMS AIEPLRVANR FRGELYRWRL LSLDSEAVAA SNGMSLNVEA
GLELPEDTQA LFVVAGFEPL AHYDKRLAHW LQRREREVKV LGAIDTGSFV LAEAGLFEQQ
RLTLHWEAID AFCERYPQLQ VTQELFEIDG RRITSAGGTS SLDLMLGLIG RDHGEPLAVQ
VSEQFVLGRI RTRQDHQRMQ IASRYDLHNK KLVRVIGEME RHCDQPLPCE ELAEQVGVSV
RQLERLFRHH LNTTPSAFYL GLRLDKARQL LRQSDLSVLE VGLACGFDSA SYFSRCYRQH
FAASPSQDRH ERPAPS
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