| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0482 |
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| Symbol | |
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| ID | 5108401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 516240 |
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| End bp | 517712 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501695 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_001185984 |
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| Protein GI | 146305519 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTT TCGCCGAACA GCAGCTCTAC ATCGGTGGCC AGTACGTCGC CGCCAGCAGC
GGCCAGACCT TCGACAGCAT CAACCCGGCC ACCGGTGAAG TGCTGGCCAA GGTGCAGCGT
GCCAGCCAGG CCGATGTCGA CCGCGCAGTG GCCAGCGCTG CCGAGGGGCA GAAGGTGTGG
GCGGCGATGA CCGCCATGCA GCGCTCGCGC ATCCTGCGCC GCGCCGTGGA CATCCTGCGC
GAGCGCAACG ACGAGCTGGC CGAGCTGGAA ACCCTCGACA CCGGCAAGCC GCTTTCCGAA
ACCCGCTACG TCGACATCGT CACCGGCGCC GACGTGCTGG AGTACTACGC AGGCCTGATC
CCGGCCATCG AGGGCGAGCA GATCCCCCTG CGCGAATCCT CCTTCGTCTA CACCCGCCGC
GAACCGCTGG GCGTGGTCGC CGGTATCGGC GCGTGGAACT ACCCAATCCA GATCGCCCTG
TGGAAATCCG CCCCGGCCCT GGCCGCCGGC AACGCGATGA TCTTCAAGCC CAGCGAAGTC
ACCTCGCTGA CCGCGCTGAA ACTGGCCGAG ATCTACACCG AGGCAGGTCT GCCCGCCGGC
GTGTTCAACG TGCTCACCGG CAGCGGCCGC GAAGTCGGCC AGTGGCTGAC CGAACATCCG
GGTATCGAGA AGGTGTCCTT CACCGGCGGC ACCGTCACCG GCAAGAAGGT GATGGCCAGC
GCCTCCAGCT CCAGCCTCAA GGAAGTGACC ATGGAGCTGG GCGGCAAGTC GCCGCTGATC
GTGTTCGAAG ACGCCGACCT CGACCGCGCC GCCGACATCG CGGTGATGGC CAACTTCTAC
AGCTCCGGCC AGGTGTGCAC CAACGGCACC CGCGTGTTCG TGCCGCGCAT GCTGCAGGCG
CGCTTCGAGG CCAAGGTGCT GGAGCGGGTC AAGCGCATCC GCCTGGGCGA TCCGCTGGAT
GACGCCACCA ACTTCGGCCC GCTGGTCAGC TACGCGCACA TGGAGAGCGT GCTCGGCTAC
ATCGAGAAAG GCCGCAGCGA GGGCGCACGC CTGCTGATCG GCGGCACGCG CGTCAGTGAC
GGCGATTACG CCAAGGGCGC CTACGTCGCC CCCACCGTGT TCACCGATTG CCGGGACGAC
ATGACCATCG TGCGCGAGGA AATCTTCGGC CCGGTGATGA GCATCCTCAT CTACGACAGC
GAAGAGGAAG TGATCCGCCG CGCCAACGAT ACCGACTACG GCCTCGCCGC CGGCGTGGTG
ACCCGCGACC TGAACCGCGC GCACCGGGTG ATCCACAAGC TGGAAGCCGG CATCTGCTGG
ATCAACACCT GGGGCGAATC GCCGGCCGAA ATGCCGGTGG GCGGCTACAA GCAATCCGGC
GTCGGCCGCG AGAACGGCCT GGTCACCCTC GGTCATTACA CCCGCATCAA GTCGGTGCAG
GTGGAGCTGG GCGGTTACAG CTCGGTGTTC TGA
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| Protein sequence | MPRFAEQQLY IGGQYVAASS GQTFDSINPA TGEVLAKVQR ASQADVDRAV ASAAEGQKVW
AAMTAMQRSR ILRRAVDILR ERNDELAELE TLDTGKPLSE TRYVDIVTGA DVLEYYAGLI
PAIEGEQIPL RESSFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTALKLAE IYTEAGLPAG VFNVLTGSGR EVGQWLTEHP GIEKVSFTGG TVTGKKVMAS
ASSSSLKEVT MELGGKSPLI VFEDADLDRA ADIAVMANFY SSGQVCTNGT RVFVPRMLQA
RFEAKVLERV KRIRLGDPLD DATNFGPLVS YAHMESVLGY IEKGRSEGAR LLIGGTRVSD
GDYAKGAYVA PTVFTDCRDD MTIVREEIFG PVMSILIYDS EEEVIRRAND TDYGLAAGVV
TRDLNRAHRV IHKLEAGICW INTWGESPAE MPVGGYKQSG VGRENGLVTL GHYTRIKSVQ
VELGGYSSVF
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