Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0451 |
Symbol | |
ID | 5108370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 479729 |
End bp | 480175 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501664 |
Product | cytochrome c556-like protein |
Protein accession | YP_001185953 |
Protein GI | 146305488 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.870649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AAGCCCTGCT GCTGGCCTGC GCCTGCCTGT TTCTGGTTGC CTGCGGTGGC GTCGATCCCG ACTCGCCGCT GGGCCAGCGC CAGGCGCTGT TCAAGCAGAT GCTCAAGGTC AGCGAGGATC TCGGTGGCAT GCTGCGCGGG CGTATCGCCT ATGACGAGGC CCGCTTCGTT ACCGGTGCGG CCGAGCTCGA TCGCCTGTCG CGCGAGCCCT GGCAGCATTT CCCCGACGTC CGTGACGACG AGCGCAGCAA GGCCAATCCC GAGCTCTGGC AGCGCCAGGA GCAGTTCCAG CAGATGGCGC GCGACCTGGA ACAGGCCACC GCCGCGCTGG TGCAGGCTAC CGTCTCGCCG CCGCTAAGGC GTTCCCGGCT GGAGCCGGCG GTACGTGAGG TCGAGGACAG TTGCGAGGCC TGCCACAAGG CGTTCCGCGC TTACTGA
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Protein sequence | MKFKALLLAC ACLFLVACGG VDPDSPLGQR QALFKQMLKV SEDLGGMLRG RIAYDEARFV TGAAELDRLS REPWQHFPDV RDDERSKANP ELWQRQEQFQ QMARDLEQAT AALVQATVSP PLRRSRLEPA VREVEDSCEA CHKAFRAY
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