| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0411 |
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| Symbol | |
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| ID | 5108333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 432261 |
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| End bp | 433742 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640501627 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001185916 |
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| Protein GI | 146305451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TGGTCTCGAC CATAAACGGT CTGGTCTGGA GCCCGGCGCT GATCTATCTA
TGTCTTGGCG TTGGTCTCTA CTTCTCCCTG CGCGGCCGCT TTCTCCAGGT TCGCCACTTC
AAAGAAATGA TTCGCCTGAT GTTCACCGGC AAGACCGATG AGCATGGCAT CACCTCCTTC
CAGGCCCTGA CCATGACCCT CGCCGGTCGC GTCGGTACCG GCAACATTGC TGGTGTGGCT
ACCGCCATCA CCTTCGGTGG TCCGGGTGCC GTGTTCTGGA TGTGGATGGT GGCCTTCCTG
GGTGCCAGCT CGGCATTCGT CGAGTCCACC CTCGGCCAGG TGTACAAGGA AAAGCTCAAC
GGTGAATACC GTGGCGGCCC GGCCTTCTAC ATCGAGCGCG GCCTGGGTCT GAAGTGGTAC
GCCTGGCTGT TCGCCATCGT TACCGTGTTC GCCTGCGGCC TGCTGCTGCC GGGTGTGCAG
GCCAACTCCA TCGCTTCCAG CGCGCAAACA GCCTTTGGTA TCGACCCGAA CGTCACAGCG
GCGGCACTGG CCGTACTGAT CGGCCTGATC ATCTTCGGCG GCGTCAAGCG TATCGCCCAC
TTCACCCAGG TGGTCGTACC GTTCATGGCG CTGGGCTACA TCCTGGTAGC GATGGTCATC
ATCCTGCTGA ACATCGAGAA GCTGCCGGAA GTCTTGCTGC TGATCGTCAA GAGCGCATTC
GGCCTCGAGG CCGGTTTCGG CGCCATCGTC GGCATGGCCA TCCAGTGGGG CGTCAAGCGC
GGTGTCTACT CCAACGAAGC AGGCCAGGGT ACCGGTCCGC ACGCTTCGTC GGCCGCCGCG
GTCAGCCACC CGGTCAAGCA GGGCCTGGTT CAGGGCTTCT CGGTCTACAT CGACACCCTG
TTCGTCTGCT CCGCCACCGC CTTCATGCTG CTGATCACTG GTCAGTACAA CGTGCAGGCG
CCGGATGGCA GCGCGATGTT CACCGGTATC GCCGGCGTAG CCGCAGGCCC GGGCTACGTG
CAGACCGCGA TGGAGAACAT GATGCCCGGC TTCGGTAACG CCTTCGTTGC CATCGCCCTG
TTCTTCTTCG CCTTCACCAC CATCCTGGCG TACTACTACA TCGCCGAAAC CAACATTGCC
TACATCAACC GCAAGGTGAA GCGCCCCATC CTCACCCTGC TGCTGAAGTT CGGCATCATC
GCGGCTACCG TGTACGGCAC CGTGCACACT GCCACCTTCG CCTGGGACCT GGGTGATCTC
GGTGTCGGCC TGATGGCCTG GCTGAACATC ATCGCCATCC TGCTCATGCA CAAGGTCGCC
TACAAGTGCC TGAAGGACTA CGAGCAGCAG TTGGACGAGG GCAAGGACCC GGTCTTCCAC
CCGGAGAAGC TCGGTATCAA GAATGCCGAC TACTGGGGCA CCAGCACCTC GGAAGAGAAC
CTGAATATCG AGAAGGGCGA AGTGCAGCAA CCGCAGCGCT GA
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| Protein sequence | MNELVSTING LVWSPALIYL CLGVGLYFSL RGRFLQVRHF KEMIRLMFTG KTDEHGITSF
QALTMTLAGR VGTGNIAGVA TAITFGGPGA VFWMWMVAFL GASSAFVEST LGQVYKEKLN
GEYRGGPAFY IERGLGLKWY AWLFAIVTVF ACGLLLPGVQ ANSIASSAQT AFGIDPNVTA
AALAVLIGLI IFGGVKRIAH FTQVVVPFMA LGYILVAMVI ILLNIEKLPE VLLLIVKSAF
GLEAGFGAIV GMAIQWGVKR GVYSNEAGQG TGPHASSAAA VSHPVKQGLV QGFSVYIDTL
FVCSATAFML LITGQYNVQA PDGSAMFTGI AGVAAGPGYV QTAMENMMPG FGNAFVAIAL
FFFAFTTILA YYYIAETNIA YINRKVKRPI LTLLLKFGII AATVYGTVHT ATFAWDLGDL
GVGLMAWLNI IAILLMHKVA YKCLKDYEQQ LDEGKDPVFH PEKLGIKNAD YWGTSTSEEN
LNIEKGEVQQ PQR
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