| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0397 |
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| Symbol | pyrB |
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| ID | 5108319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 414011 |
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| End bp | 415018 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501613 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001185902 |
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| Protein GI | 146305437 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAC TCGCCGCCAA GCGCCCGCTG CAACTGAATG ACCAAGGTCA GTTGCGCCAC
TTCCTCTCAC TCGACGGCCT GCCCCGCGAG CTGTTGACCG AAATCCTCGA CACCGCCGAC
TCCTTCCTCG AAGTCGGCGC GCGCGCGGTG AAGAAAGTCC CGCTGCTGCG CGGCAAGACC
GTGTGCAATG TGTTCTTCGA GAATTCCACG CGCACCCGCA CCACCTTCGA GCTGGCCGCC
CAGCGCCTGT CGGCCGACGT CATCAGCCTC AACGTCTCCA CCAGCTCCAC CAGCAAGGGC
GAGACGCTGT TCGACACCCT GCGCAACCTC GAAGCCATGG CCGCCGACAT CTTCGTCGTG
CGACATGCCG ACTCCGGCGC CGCGCACTTC ATCGCCGAGC ACGTGTGCCC GAACCTGGCG
ATCATCAACG GCGGCGACGG TCGTCACGCG CATCCGACCC AGGGCATGCT CGACATGCTC
ACCATCCGCC GCCACAAGGG CGACTTCGAA AACCTCTCGG TGGCCATAGT CGGCGATATC
CTGCACTCGC GGGTGGCGCG CTCGAACATG TTGGCGCTGA AGACCCTGGG CTGCCCGGAC
ATCCGCGTGA TCGCGCCGAA GACCCTGCTG CCCATCGGCC TGGAAGAAAG CTACGGCGTG
CGTGTGTTCA GCGATGCCAA CGAAGGCCTC AAGGACGTCG ACGTGGTGAT CATGCTGCGT
CTGCAGCGCG AGCGCATGCA GGGCGGCCTG CTGCCCAGCG AGGGTGAGTT CTACCGCCTG
TTCGGCCTCA CCGAGCAGCG CCTCAAGCTG GCCAAACCCG ATGCCCTGGT GATGCACCCG
GGGCCAATCA ACCGTGGCGT GGAGATCGAG TCGGCAGTGG CTGACGGCCC GCAGTCGGTG
ATCCTCAACC AGGTCACCTA CGGCATCGCC ATCCGCATGG CTGTGCTGTC CATGGCCATG
AGCGGGCAGA ACGCCCAACG TCAACTCAAC GCCGAGGAGG CCAACTGA
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| Protein sequence | MTPLAAKRPL QLNDQGQLRH FLSLDGLPRE LLTEILDTAD SFLEVGARAV KKVPLLRGKT
VCNVFFENST RTRTTFELAA QRLSADVISL NVSTSSTSKG ETLFDTLRNL EAMAADIFVV
RHADSGAAHF IAEHVCPNLA IINGGDGRHA HPTQGMLDML TIRRHKGDFE NLSVAIVGDI
LHSRVARSNM LALKTLGCPD IRVIAPKTLL PIGLEESYGV RVFSDANEGL KDVDVVIMLR
LQRERMQGGL LPSEGEFYRL FGLTEQRLKL AKPDALVMHP GPINRGVEIE SAVADGPQSV
ILNQVTYGIA IRMAVLSMAM SGQNAQRQLN AEEAN
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