| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0388 |
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| Symbol | |
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| ID | 5108310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 402470 |
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| End bp | 404041 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501604 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001185893 |
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| Protein GI | 146305428 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CGATCAAGAT CTTCGTCCCG CGCGATGCCA CCGCGCTCAG CCTGGGCGCC
GACAAGGTAG CCAAGGCCAT CGCCGCCGAG GCCGCGGCGC GTGGTATCGA GGTGCAACTG
GTGCGCAACG GCTCACGCGG GCTGTTCTGG CTAGAGCCGC TGGTCGAGGT CGCCACGCCG
ACTGGTCGCG TGGCCTATGG CCCGGTCAAG GCACGCGATG TCGCTGGTTT GTTCGATGCC
GGTTTCCTCG AGGGTAAGCA GCATGCGCTG GGCCATGGCC TGACCGACGA AATCGACTAC
CTCAAGCGCC AGGAGCGCCT GACCTTCGCC CGTGTCGGCA TCACCGATCC GCTGTCGCTG
GAGGACTACA TCGCCCACGA CGGCTACCGC GGCCTCAAGC GCGCCCTCGG CATGACGCCC
GAAGCGATCG TCGCCGAGGT CACCGAATCC GGCCTGCGTG GTCGTGGCGG CGCGGCGTTC
CCCACCGGCA TCAAGTGGCG CACCGTGCTC GGTTGCCAGG CCGAACAGAA GTACATCGTC
TGCAACGCCG ACGAAGGCGA CTCGGGCACC TTCTCCGACC GCATGGTGAT GGAAGACGAC
CCCTACGTGC TGATCGAAGG CATGACCATC GCCGGTCTCG CTGTCGGCGC CACCAAGGGC
TATATCTACC TGCGTTCTGA ATACCCGCAC GCCGAGGCGG TGCTGCTCGA GACCATCGCC
CGTGCCACGG CCGCCGGTTA CCTGGGCGAT GACGTGCTCG GCAGCGGCAA GGCCTTCCAC
CTGGAGCTGC GCCGCGGCGC CGGCGCCTAT ATCTGCGGCG AGGAAACCGC GCTTCTGGAA
AGCATCGAGG GTAAGCGCGG CACCGTGCGG CCGAAGCCGC CGCTGCCGGC CATCGAGGGC
CTGTTCGGCA AACCGACGGT GATCAACAAC GTGATCTCGC TGGCTTCGGT GCCGATCATC
CTCGACAAGG GCGGCGCCTA CTACAAGGAC TACGGTATGG GCCGCTCGCT CGGCACCCTG
CCGATCCAGC TGACCGGCAA CATCGCCCGT GGCGGCCTGA TCGAGAAGGC CTTCGGTATC
ACCTTGCGCG AGTTGCTCTA CGAATATGGC GGCGGTTCGG CCAGCGGCCG GCCGATCCGC
GCGGTGCAGG TCGGCGGCCC GCTCGGCGCT TACCTGCCCG AGTCGCAGTT CGACACGCCG
CTGGATTACG AGGCCTTCGC CGCTCTCGGC GCGGTGCTCG GCCACGGCGG CATCGTGGTG
TTCGACGACA CCGTCGACAT GGCCGACATG GCGCGCTACG CCATGGAGTT CTGCGCGGTG
GAATCCTGCG GCAAGTGCAC GCCCTGCCGG ATCGGCTCGA CCCGCGGCGA GGAGCTGCTG
TCGCAGATCA TCGTGGCCCG TTCCGAAGGC CCGCAGCCGG GGCGCATCGA ACTGCTCAAG
AGCCTCTGCG ACACCATGCT CGGCGCCTCG CTCTGCGCCC TTGGCGGCAT GACACCCTAT
CCGGTGCTGA GCGCCATCAA CCACTTTCCC GAGGACTTCG GCGTGTCGCA AGACAGCGCC
GAAGCCCGCT GA
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| Protein sequence | MSEPIKIFVP RDATALSLGA DKVAKAIAAE AAARGIEVQL VRNGSRGLFW LEPLVEVATP
TGRVAYGPVK ARDVAGLFDA GFLEGKQHAL GHGLTDEIDY LKRQERLTFA RVGITDPLSL
EDYIAHDGYR GLKRALGMTP EAIVAEVTES GLRGRGGAAF PTGIKWRTVL GCQAEQKYIV
CNADEGDSGT FSDRMVMEDD PYVLIEGMTI AGLAVGATKG YIYLRSEYPH AEAVLLETIA
RATAAGYLGD DVLGSGKAFH LELRRGAGAY ICGEETALLE SIEGKRGTVR PKPPLPAIEG
LFGKPTVINN VISLASVPII LDKGGAYYKD YGMGRSLGTL PIQLTGNIAR GGLIEKAFGI
TLRELLYEYG GGSASGRPIR AVQVGGPLGA YLPESQFDTP LDYEAFAALG AVLGHGGIVV
FDDTVDMADM ARYAMEFCAV ESCGKCTPCR IGSTRGEELL SQIIVARSEG PQPGRIELLK
SLCDTMLGAS LCALGGMTPY PVLSAINHFP EDFGVSQDSA EAR
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