Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0371 |
Symbol | |
ID | 5108293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 385089 |
End bp | 386006 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501587 |
Product | hypothetical protein |
Protein accession | YP_001185876 |
Protein GI | 146305411 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCA GAGCCCATCA CGTGCTGATC GGCCTGTTCA CCGTGCTCAC GGTGGGCGCC GCGCTGCTGT TCGCCCTGTG GCTGAACAAG GCCGGTGCCG ATCGCGCCTT CACCGATTAC GAGGTGATCT TCAACGAAGC TGTCAGCGGC CTGTCGCAAG GCAGCGCGGT GCAGTACAGC GGGATCAAGG TCGGCGACGT GATCAGCCTC GGCCTCGACC CGGAAGATCC GCGCACGGTG CGCGCGCGCA TCCGCATCGC CGGCCATACG CCGATCAAGC AGGACACCCG GGCGCGCCTG TCGATCACCG GCATCACCGG CCTGGCCGTG ATCCAGCTGT ACAGCGGCAG CCCGGAAAGC CCGCCGCTGG AAGGCAAGGA TGGTCAGCCC GGGATCATCA TCGCCGACCG CTCGCCGCTT TCCCGGCTGA TGGCCAACGG CGAGGACCTG GTGAGCAACA TCACCCGCCT GCTCAACCGC GCCAACCGCA TGCTCTCGCG CGAGAATGCC GAGCGCGTCT CGCGCACCCT GGAGAACCTG GAGCAGGCCA CGGCCGGTAT CGCCAGCCAG CGCGACGAAC TCAGCGCCGC TTTGCAGCAG GCCGGCGCCG CCACCCGCGA AGCGGCCGAA CTGATGCGCA CCGCCAACCG CCTGCTCGAC GGCCAGGGTA GCCAGGCCCT GGACAACGCC GAACGCCTGA TGGCCTCGCT GGAGCGCAGC AGCCGCAGCA TCGAGCAGTT GCTGGAAAGC AACCGCAGCG CCCTGGACAG CGGCATGCAG GGCCTCGGCG AACTGGGCCC GGCGATTGGC GAGCTGCGCG ACACCCTCAG CGCCCTGCGC GGCTTCTCCC GTCGCCTGGA ACAGGACCCC ACCGGCTACC TGCTGCGCAG CGACAGCATC AAGGAGTTCC AACCATGA
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Protein sequence | MEPRAHHVLI GLFTVLTVGA ALLFALWLNK AGADRAFTDY EVIFNEAVSG LSQGSAVQYS GIKVGDVISL GLDPEDPRTV RARIRIAGHT PIKQDTRARL SITGITGLAV IQLYSGSPES PPLEGKDGQP GIIIADRSPL SRLMANGEDL VSNITRLLNR ANRMLSRENA ERVSRTLENL EQATAGIASQ RDELSAALQQ AGAATREAAE LMRTANRLLD GQGSQALDNA ERLMASLERS SRSIEQLLES NRSALDSGMQ GLGELGPAIG ELRDTLSALR GFSRRLEQDP TGYLLRSDSI KEFQP
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