| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0353 |
|---|
| Symbol | |
|---|
| ID | 5108275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 362194 |
|---|
| End bp | 363360 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640501569 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_001185858 |
|---|
| Protein GI | 146305393 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTGC CGTCCTTCCG AGAGCAGTTC GCCGCGCTGA TCGCAGCGCC CTCGGTGAGC
TGCACCCAGC CCAGCTGGGA TCAGAGCAAC GCGCCTGTCA TCGAGCTGCT CGCCGCCTGG
CTCGGCGACC TGGGCTTCGC CTGCGAAACC CAGCAGATCG CCCCCGGCAA ATTCAATCTG
CTCGCCAGCT ACGGCTCCGG CCCCGGCGGC CTGGTGCTGG CCGGGCACAG CGATACCGTG
CCGTTCGACG CCGCCCTGTG GCAGAGCGAC CCGCTCAAGC TGACCGAAGT GGGCGACCGC
TGGGTGGGCC TGGGCAGCTG CGACATGAAG GGCTTCTTCG CCCTGGCCAT CGAGGCCGTG
CGGCCCTTGC TCGATCAGCC CTTCCAGCAA CCTTTGCTGA TTCTCGCCAC CTGCGACGAA
GAAAGCTCCA TGGCCGGTGC CCGCGCCCTG GCCGATGCCG GCCGGCCACT GGGCCGTGCG
GCGGTGATCG GCGAGCCGAC CGGCCTCAAG CCCATCCGCC TGCACAAGGG CGTGATGATG
GAGCGCATCG ATATCCTCGG GCGCAGTGGT CACAGCTCCG ACCCGAGTCT CGGGCATAGC
GCGCTGGAGG CCATGCAGGA CGTGATGGGC GAGCTGCGCG GCCTGCGTGC GCAGTGGCAG
CGCGAATTCA ACAACCCGCA ATTCGGCGTG CCGCAACCGA CGCTGAACCT CGGCTGCATC
CACGGCGGCG ACAACCCCAA CCGCATCTGC GGGCAGTGCG CGCTGGAATT CGACCTGCGC
CCGTTGCCGG GCATGGATCC GGAACAGCTG CGCGCGGCGA TTCGCGGCAA GCTGCAGCCG
CTGGCGCTCA AGCATCAGGT GCGCATCGAC TATGGCCCGC TGTTCCCCGA AGTGCCGCCG
TTCGAGCAGC GCGCCGACGC CGAACTGGTG CGCCTGGCCG AGCGGCTGAC CGGGCATGCG
GCGCAGGCGG TGGCATTCGG CACCGAAGCG CCTTATCTTC AGCGCCTTGG CTGCGAGACC
CTGGTGCTCG GCCCGGGTGA CATCGACTGC GCGCATCAGC CCGGGGAACA CCTGGAGCTG
GCCCGCATCG AACCTACGGT GGCGTTGCTG CGCCAACTGA TCCAACACTA CTGCCTGACA
CGGAGCGAAG ACGTGCAGCG ACGATGA
|
|---|
| Protein sequence | MPLPSFREQF AALIAAPSVS CTQPSWDQSN APVIELLAAW LGDLGFACET QQIAPGKFNL
LASYGSGPGG LVLAGHSDTV PFDAALWQSD PLKLTEVGDR WVGLGSCDMK GFFALAIEAV
RPLLDQPFQQ PLLILATCDE ESSMAGARAL ADAGRPLGRA AVIGEPTGLK PIRLHKGVMM
ERIDILGRSG HSSDPSLGHS ALEAMQDVMG ELRGLRAQWQ REFNNPQFGV PQPTLNLGCI
HGGDNPNRIC GQCALEFDLR PLPGMDPEQL RAAIRGKLQP LALKHQVRID YGPLFPEVPP
FEQRADAELV RLAERLTGHA AQAVAFGTEA PYLQRLGCET LVLGPGDIDC AHQPGEHLEL
ARIEPTVALL RQLIQHYCLT RSEDVQRR
|
|---|
| |