Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0349 |
Symbol | |
ID | 5110318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 357695 |
End bp | 358582 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501565 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001185854 |
Protein GI | 146305389 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT TCAGTTTCTC CAGCATCATG CTCTGGGCGG GGCTGGTGTT CATCTACCTG CCCATGGTCA TCCTGGTCAT CTACTCGTTC AACGCCTCGC GGCTGGTAAC GGTCTGGGGT GGCTGGTCGG TGAAGTGGTA CGTCGGCCTG CTGGACAACA CCCAGCTGAT GAACTCGGTG ATGCGCTCGC TGGAAATCGC CTGCTACACC GCCATCGCGG CGGTGGCGCT GGGCACCCTG GCGGCCTTCG TGCTGACTCG CATCACCCGC TTCAAGGGAC GCACCCTGTT CGGTGGCCTG GTCACCGCAC CGCTGGTGAT GCCCGAGGTG ATCACCGGTC TGTCGCTGCT GCTGCTGTTC GTGCTGATGG CGCAGCTGAT CGGCTGGCCG GCGCAGCGTG GCATGACCAC TATCTGGATC GCCCACACCA CCTTCTGCTC GGCCTACGTG GCGGTGGTGG TGTCGTCGCG CCTGCGCGAG CTGGACATGT CCATCGAAGA GGCGGCCATG GACCTGGGGG CCAAGCCGTG GAAGGTGTTC TTCCTGATCA CCGTGCCGAT GATCGCGCCA TCGCTGGCAG CCGGTGCCAT GATGTCCTTC GCCCTGTCGC TGGACGATCT GGTGCTGGCC AGCTTCGTCT CCGGTCCGGG TTCGACCACC CTGCCGATGG AGATCTTCTC CGCCGTGCGT CTGGGGGTTA AGCCTGAGAT CAATGCGGTG GCCAGCCTGA TCCTGCTGGC GGTGTCCTTC GCCACCTTCC TCGCCTGGTT CTTCGCCCAT CGTGCCGAGG AAAAGCGCAA GAAGGCCCTG CAGCAGGCCA TGGACGAAAC CACCAGCCCG TCCTGGCAGC AGGTGGTCGA CAGCCGCCGC AGCGCCAGCA GCAACTGA
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Protein sequence | MKRFSFSSIM LWAGLVFIYL PMVILVIYSF NASRLVTVWG GWSVKWYVGL LDNTQLMNSV MRSLEIACYT AIAAVALGTL AAFVLTRITR FKGRTLFGGL VTAPLVMPEV ITGLSLLLLF VLMAQLIGWP AQRGMTTIWI AHTTFCSAYV AVVVSSRLRE LDMSIEEAAM DLGAKPWKVF FLITVPMIAP SLAAGAMMSF ALSLDDLVLA SFVSGPGSTT LPMEIFSAVR LGVKPEINAV ASLILLAVSF ATFLAWFFAH RAEEKRKKAL QQAMDETTSP SWQQVVDSRR SASSN
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