| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0347 |
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| Symbol | |
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| ID | 5110316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 355639 |
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| End bp | 356793 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501563 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001185852 |
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| Protein GI | 146305387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.89864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCG CTTCCAGCGC CTACAAAAAA GCCCTCGAGG GAAACCAGAC ACCGAAAGAG
GTGCTGGTCA AGATCGATCG GGTAACCAAG AAATTCGACG AGACAGTGGC AGTCGACGAC
GTATCGCTGA CCATCAACAA GGGTGAGATC TTCGCCCTGC TCGGTGGCTC GGGATCGGGC
AAATCCACGC TGCTGCGCAT GCTCGCCGGC TTCGAGCGGC CCACCGAGGG ACGCATCATC
CTCGACGGTG TGGACATCAC CGACATGCCG CCCTACCAGC GGCCGATCAA CATGATGTTC
CAGTCCTACG CGCTGTTCCC GCACATGACC GTGGCGCAGA ACATCGCCTT CGGTCTCAAG
CAGGACAAGC TGCCCCAGGC CGAGATCGAC GAGCGCGTGG CCGAGATGCT CAAGCTGGTG
CACATGACCC AGTACGCCAA GCGCAAGCCG CATCAACTCT CGGGCGGTCA GCGTCAGCGC
GTGGCCCTGG CCCGTTCCCT GGCCAAGCGT CCCAAGCTGC TGCTGCTCGA CGAGCCGATG
GGCGCGCTGG ACAAGAAGCT GCGCTCGCAG ATGCAGCTGG AGCTGGTGGA GATCATCGAG
CGCGTCGGCG TGACCTGCGT GATGGTCACC CACGACCAGG AAGAGGCCAT GACCATGGCC
CAGCGCATCG CCATCATGCA CCTGGGCTGG ATCGCCCAGA CCGGCAGCCC GGTGGACATC
TACGAGACGC CGACCAGCCG CCTGGTGTGC GAGTTCATCG GCAACGTCAA CCTGTTCGAC
GGCCAGATCG TCAGCGATGA AGCCGACCAC GCGATCATCG ATTGCCCGCA GCTGGACAAG
CCGATCTACA TCGGCCATGG CGTCAGTACC CGTGCCGAGG ACAAGAAGGT CAGCTACGCC
CTGCGCCCGG AAAAACTGCT GATGGCCACC GCCTTGCCGG CCGACCATGA GCACCCCGAG
TACAACTGGA GCCGTGGCCA CGTGCACGAC ATCGCCTACC TCGGCGGCCA TTCGGTGTAC
CACGTCAAGC TCAGCTCCGG GCAGATCGTG CAGTGCTTCA TCGCCAACGC CGAGCGCCGC
GGCAAGCGCC CGACCTGGGA CGATCCGGTG GTGGTGTACT GGGAAGACGA CAGCGGCGTG
GTACTGCAAT CATGA
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| Protein sequence | MAVASSAYKK ALEGNQTPKE VLVKIDRVTK KFDETVAVDD VSLTINKGEI FALLGGSGSG
KSTLLRMLAG FERPTEGRII LDGVDITDMP PYQRPINMMF QSYALFPHMT VAQNIAFGLK
QDKLPQAEID ERVAEMLKLV HMTQYAKRKP HQLSGGQRQR VALARSLAKR PKLLLLDEPM
GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA QRIAIMHLGW IAQTGSPVDI
YETPTSRLVC EFIGNVNLFD GQIVSDEADH AIIDCPQLDK PIYIGHGVST RAEDKKVSYA
LRPEKLLMAT ALPADHEHPE YNWSRGHVHD IAYLGGHSVY HVKLSSGQIV QCFIANAERR
GKRPTWDDPV VVYWEDDSGV VLQS
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