| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0344 |
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| Symbol | |
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| ID | 5110313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 352167 |
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| End bp | 353264 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501560 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185849 |
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| Protein GI | 146305384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.574749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TCGGCAAGAC CCTTCTCGCG TTGTCCCTGA CCGCCGCCGT GGCAGGCGCT
GCGCAGGCTG ACAGCAAGGT GCTGCATGTC TACAACTGGA GCGACTACAT CGCCGAAGAC
ACCCTGGCCA ACTTCGAGAA GGAAACCGGC ATCAAGGTCG TCTATGACGT CTTCGACAGC
AACGAGGTGC TGGAAGCCAA GTTGCTGGCC GGCAGCTCCG GTTACGACGT GGTGGTACCG
TCCAACCCCT TCCTGGCCAA GCAGATCAAG GCGGGCGTGT TCCAGAAGCT GGACAAGTCC
AAGCTGCCGA ACTGGTCGAA CCTCGACCAG GACCTGCTCA AGGCGCTGGA TCCGAGCGAC
CCGGGCAACC AGTACTCGAT CCCCTACATG TGGGGCACCA TCGGCATCGG CTACAACGTC
GACAAGGTCA AGGCCGTGCT CGGCGACGAC GCGCCGGTGG ATTCCTGGGA TCTGGTGTTC
AAGCCGGAGA ACATGGAAAA GCTGAAGTCC TGCGGCGTGT CCTTCCTCGA CTCGCCGACC
GAAATTCTCC CGGCGGCGCT GCACTACCTG GGCTACGCGC CGGACAGCAG CAAGGCTGAC
GAGCTGAAGA AGGCCGAGGA ACTGTTCCTC TCCATCCGTC CTTCGGTGGC CTACTTCCAC
AGCTCCAAGT ACATCTCCGA CCTGGCCAAC GGCAACATCT GCGTCGCCAT CGGCTACTCG
GGCGACATCT ATCAGAGCAA GGCACGCGCC GAGGAAGCCA AGAACGGCGT GAACGTCGGC
TACAACATTC CCAAGGAGGG CGCAGGTTCC TTCTTCGACA TGCTGGCGGT GCCGGCCGAC
GCCAAGAACG TCGAGGCTGC CCACGTGTTC CTCAACTACC TGATGGAGCC GGCGGTGATG
GCCAACATCA CCAACTACGT GCAGTTCCCC AACGGCAACG CCGCGGCCAC GCCGCTGGTG
GATGAGGCCC TGCGCACCGA TCCGGGCGTA TACCCGACGC CGGAAGTGCT GAAGAAGATC
TACACCTTCC CGGACCTGGC TCCGGCGGTG CAGCGCAACA TGACCCGCAG CTGGACCAAG
ATCAAGTCCG GTCGCTAA
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| Protein sequence | MKTFGKTLLA LSLTAAVAGA AQADSKVLHV YNWSDYIAED TLANFEKETG IKVVYDVFDS
NEVLEAKLLA GSSGYDVVVP SNPFLAKQIK AGVFQKLDKS KLPNWSNLDQ DLLKALDPSD
PGNQYSIPYM WGTIGIGYNV DKVKAVLGDD APVDSWDLVF KPENMEKLKS CGVSFLDSPT
EILPAALHYL GYAPDSSKAD ELKKAEELFL SIRPSVAYFH SSKYISDLAN GNICVAIGYS
GDIYQSKARA EEAKNGVNVG YNIPKEGAGS FFDMLAVPAD AKNVEAAHVF LNYLMEPAVM
ANITNYVQFP NGNAAATPLV DEALRTDPGV YPTPEVLKKI YTFPDLAPAV QRNMTRSWTK
IKSGR
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