Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0315 |
Symbol | |
ID | 5110285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 322382 |
End bp | 323506 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501532 |
Product | ABC-2 type transporter |
Protein accession | YP_001185821 |
Protein GI | 146305356 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGCC TGGGCAACAT CTTCCACCTC GGCATCAAGG AGCTGCGCAG CCTGCAGCAC GACCTGGCGC TGGTGCTGCT GATTCTCTGG GCCTTCAGCA TGGGCGTGTA CTCGGCCGCC ACCAGCATCC CGGAGAGCCT GCACAACGCG GCCATCGCGG TAGTCGACGA GGACCAGTCG CAGCTCTCCG AACGCCTGAT CCAGGCCTTT CAGCCGCCCT ATTTCCGCAC GCCCGAGCGC ATCGACCTGA GCCAGATGGA TCAGGGCATG GATTCCGGGC GCTACACCTT CACCCTGAAC ATTCCGCCGA ACTACCAGCG CGACGTGCTG GCCGGCCGCA GCCCGGCGAT TCAGCTCAAC GTCGATGCTA CTCAGGTGAG CATGGCCTTC ACCGGCGCCG GCTATATCCA GAACATCGGC GCCAGCGAGG TGGCCGAGTT CGTCCGCCGC TACCGCGGCG AGGCGCAACA GCCGGCCGAA CTGGTCGTGC GGGTGGCGTT CAATCCCAAC CTGACCCGCG CCTGGTTCGG CTCGGTGATG GAGGTGATCA ACCAGATCAC CATGCTGTCG ATCATCCTCA CCGGCGCGGC GCTGATCCGC GAGCGCGAAC ACGGCACGGT GGAGCACCTG CTGGTGATGC CGGTGACGCC GCTGCAGATC ATGCTGGCCA AGGTCTGGTC CATGGGCCTG GTGGTGCTGA CGGCCGCCGC GCTGTCGCTG CTGCTGGTGG TACAGGGCTG GCTGCAGGTA CCGATCGAGG GTTCGCTGGC GCTGTTTCTG GCGGGCGCGG CGCTGCACCT GTTCGCCACC ACTTCGATGG GCATCTTCTT CGGCACCGTG GCGCGCTCGA TGCCGCAGCT GGGCCTGCTG ATCATCCTGG TGCTGCTGCC GCTGCAGATT CTCTCCGGCG GCACCACGCC GCGCGAGAGC ATGCCGGAGC TGGTGCAGCA GATCATGCTG GCGGCGCCGA CCACCCACTT CGTCGACCTG GCCCAGGCCA TTCTCTACCG CGGCGCCGGG CTGGCCATCG TCTGGCCGCA ACTGCTGACC ATCGCCGTGA TCGGCACGCT GTTCTTCCTC GCCGCGCTGG CGCGCTTTCG CAAGACCCTG GCGCAGATGG CGTAG
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Protein sequence | MESLGNIFHL GIKELRSLQH DLALVLLILW AFSMGVYSAA TSIPESLHNA AIAVVDEDQS QLSERLIQAF QPPYFRTPER IDLSQMDQGM DSGRYTFTLN IPPNYQRDVL AGRSPAIQLN VDATQVSMAF TGAGYIQNIG ASEVAEFVRR YRGEAQQPAE LVVRVAFNPN LTRAWFGSVM EVINQITMLS IILTGAALIR EREHGTVEHL LVMPVTPLQI MLAKVWSMGL VVLTAAALSL LLVVQGWLQV PIEGSLALFL AGAALHLFAT TSMGIFFGTV ARSMPQLGLL IILVLLPLQI LSGGTTPRES MPELVQQIML AAPTTHFVDL AQAILYRGAG LAIVWPQLLT IAVIGTLFFL AALARFRKTL AQMA
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