Gene Pmen_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0301 
Symbol 
ID5110271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp309603 
End bp311105 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content66% 
IMG OID640501518 
ProductPpx/GppA phosphatase 
Protein accessionYP_001185807 
Protein GI146305342 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAG CTCCTGCCGA GAACTACCCC CTGATCGCCG CCATCGACCT GGGCTCGAAC 
AGCTTTCATA TGGTGCTGGC CAAGGCCGAC CATGGCGAGA TCCGCATCCT CGAACGACTC
GGCGACAAGG TACAGCTGGC CGCCGGTATC GACGAGGAGC GCCAGCTCAG CGAGGAGGCC
ATGCAGCGCG GGCTGGACTG CCTGCGCCGC TTCGCCCAGT TCACCAACAG CCTGCCGGAA
GGCGCCGTAC GCATCGTCGG CACCAACGCC CTGCGCGAAG CGCGCAACCG CGCGGTGTTC
ATCCGCCGCG CCGAGGAGAT TCTCGGCCAT CAGGTCGAGG TGATTTCCGG CCGCGAGGAA
GCGCGCCTGA TCTACCTGGG CGTGTCCCAC AGCATCGCCG ACACTCCCGG CAAGCGCCTG
GTCGCCGATA TCGGCGGCGG CAGCACCGAA TTCATCATCG GCCAGCGTTT CGAGCCGCTG
CTGCGCGAGA GCCTGCAGAT GGGCTGCGTC AGCTTCACCC AGCGCTACTT CAAGGACGGC
AAGATCACCC CGGCGCGCTA TGCCCAGGCC TACACCGCCG CCCGTCTGGA ACTGATGGGC
ATCGAGCAGG CCCTGCGCCG CCTCGGCTGG GAGGATGCCG TGGGCGCCTC CGGCACCATC
AAGGCCATCG GCCTGGCGAC CAAGGCCGCC GGCCTGGGCA ATGGCGAGGT CACGGTCGAG
GGTCTGGCCT GGCTCAAGCG CAAGCTGTTC AAACTGGGCG AGGTGGAGAA GATCGACCTC
GACGGCATCA AGCCGGATCG CCGCAGCATC TTCCCGGCCG GCTTGGCGAT TCTCGAAGCC
ATCTTCGACG CCTGCGAGAT CCAGCGCATG AGCCACTCCG AAGGGGCGCT GCGTGAAGGC
GTGCTGTACG ACCTGCTCGG TCGCCATCAG CACGAGGACG TGCGCGAACG CACGCTGTCG
GCCTTCATGG AGCGTTATCA CGTCGACCTG GATCAGGCGG CGCGGGTCGA GACCAAGGCG
CTCTCGGCAC TGGACAAGGT TGCCGACGAC TGGGGCCTGA CCGACGACTG GCACCGCGAG
CTGCTCAGCT GGGGCGCCAG GGTCCACGAG GTGGGCCTGG ATATCGCCCA CTACCAGTAC
CACAAGCACG GCGCCTACCT GATCGAACAC TCCGATCTGT CCGGTTTTTC GCGCCAGGAT
CAGCAGATGC TCGCCCTGCT GGTGCGCGGC CACCGACGCA ACATCCCCAG GGACAAGTTC
GCCGAATTCG GCGAGGAAGG CGTCAAGCTG ATGCGCCTGT GCGTGCTGCT GCGCTTCGCC
ATCCTCTTCC ATCACATCCG CGGCACCCAG GACATGCCAC AGGTGCAGCT CAAGGCCGGC
GAGAACAGTC TGGAAGTGCA CTTCCCCGAT GGCTGGCTGG CAGCCAACCC GCTGACCCAG
GCCGATTTCG AAGCCGAAGC GGAGTGGCTC AAGCGCATCG ATCTGACCCT GAGCGTGCGC
TGA
 
Protein sequence
MPKAPAENYP LIAAIDLGSN SFHMVLAKAD HGEIRILERL GDKVQLAAGI DEERQLSEEA 
MQRGLDCLRR FAQFTNSLPE GAVRIVGTNA LREARNRAVF IRRAEEILGH QVEVISGREE
ARLIYLGVSH SIADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFKDG
KITPARYAQA YTAARLELMG IEQALRRLGW EDAVGASGTI KAIGLATKAA GLGNGEVTVE
GLAWLKRKLF KLGEVEKIDL DGIKPDRRSI FPAGLAILEA IFDACEIQRM SHSEGALREG
VLYDLLGRHQ HEDVRERTLS AFMERYHVDL DQAARVETKA LSALDKVADD WGLTDDWHRE
LLSWGARVHE VGLDIAHYQY HKHGAYLIEH SDLSGFSRQD QQMLALLVRG HRRNIPRDKF
AEFGEEGVKL MRLCVLLRFA ILFHHIRGTQ DMPQVQLKAG ENSLEVHFPD GWLAANPLTQ
ADFEAEAEWL KRIDLTLSVR