Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0299 |
Symbol | |
ID | 5110269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 306217 |
End bp | 307230 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501516 |
Product | delta-aminolevulinic acid dehydratase |
Protein accession | YP_001185805 |
Protein GI | 146305340 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.231605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTTA CCCCCGCCAA TCGCCTGTTC CCCGCCACCC GCCTGCGCCG CAACCGCCGC GACGATTTCT CCCGCCGTCT GGTACGCGAA CACCGTCTGA GCGTCGATGA CCTGATCCTG CCGGTGTTCG TCCTCGACGG CGACAACCGC CGCGAAGCCG TGCCGTCGAT GCCGGGCGTC GAGCGCCTGT CCATCGACCT GCTGCTCCAG GAAGCCGAAC ACTGGGTCGA ACTGGGCATT CCGGCGCTGG CGCTGTTCCC GGTCACCCCG CTGGAGAAGA AGTCCCTCGA CGGCGCCGAG GCCTGGAACC CGGACGGCAT TGCCCAGCGC GCGATCCGCG CCCTGCGGGC GAAATTCCCC GAGCTCGGGG TGATCAGCGA CGTCGCCCTC GACCCTTTCA CCACCCACGG TCAGGACGGC ATCCTCGACG ACTCCGGCTA CGTGCAGAAC GACATCACCG TCGATGCCCT GGTCAAGCAG GCGCTGTCGC ATGCCGAGGC CGGTGCCCAG GTAGTGGCCC CCTCGGACAT GATGGATGGC CGCGTGCAGG CGATTCGCGA GGCGCTGGAG CTGGCCGACC ATCCCAACGT GCGCATCATG GCCTACTCGG CCAAGTACGC CAGCGCCTAC TACGGTCCGT TCCGCGATGC GGTGGGCTCG GCGGCCAACC TCGGCAAGGG CAACAAGCTC GGCTACCAGA TGGACCCGGC CAACGGCAAC GAGGCGCTGC ACGAAGTGGC CGCCGACCTG GCCGAAGGCG CCGACATGGT CATGGTCAAG CCCGGCATGC CGTATCTGGA CATCCTCTGG CGGGTGAAGG ATGCCTACAA GGTGCCCACA TTCGTCTATC AGGTCAGTGG CGAGTACGCC ATGCACATGG CGGCGATCCA GAACGGCTGG CTCGGCGAGG CAGTGATCCT CGAGTCGCTC ACCGCCTTCA AACGCGCCGG TGCCGATGGC ATCCTCACCT ATTTCGCCGT ACGGGCGGCA GAACTGCTAA AACAAGGGCG ATGA
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Protein sequence | MSVTPANRLF PATRLRRNRR DDFSRRLVRE HRLSVDDLIL PVFVLDGDNR REAVPSMPGV ERLSIDLLLQ EAEHWVELGI PALALFPVTP LEKKSLDGAE AWNPDGIAQR AIRALRAKFP ELGVISDVAL DPFTTHGQDG ILDDSGYVQN DITVDALVKQ ALSHAEAGAQ VVAPSDMMDG RVQAIREALE LADHPNVRIM AYSAKYASAY YGPFRDAVGS AANLGKGNKL GYQMDPANGN EALHEVAADL AEGADMVMVK PGMPYLDILW RVKDAYKVPT FVYQVSGEYA MHMAAIQNGW LGEAVILESL TAFKRAGADG ILTYFAVRAA ELLKQGR
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