| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0289 |
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| Symbol | |
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| ID | 5110259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 296432 |
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| End bp | 298342 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501506 |
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| Product | ABC transporter related |
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| Protein accession | YP_001185795 |
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| Protein GI | 146305330 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC TCCAGAACCT CACTCTACAG CGTGGTCCGC AACGCCTGCT CGAAGGCGCC
GAGCTGACCC TGCACGCCGG CCAGAAAGTC GGTCTGATCG GTGCCAATGG CGCCGGTAAA
TCCAGCCTGT TCGCCCTGCT GCGCGGTGAG CTCGGTCCCG ACGCGGGCGA CTGCCAGCTG
CCGCCGGACT GGCGCATCGC CCATATGCGC CAGGAGGTGG ACAACCTCGA GCGTCTGGCG
GTGGACTACG TGCTCGATGG CGATGTGCAC CTGCGCGCGA TCCAGGCCGA ACTGGCCAGG
GCCGAGGCCG CCCATGACGG CAGCGCCATC GCCCGTCTGC ACAGCGAACT GGACAATGCC
CAGGGCTACA GCGCCGATTC GCGTGCGCGC AAGCTGCTGG CCGGCCTGGG CTTTACCAGC
GAGCAGATGG ACAGGCGCGT CGGCGACTTC TCCGGGGGCT GGCGCATGCG CCTGAACCTG
GCTCAGGCAC TGATGTGCCC GTCCGAGCTG CTGCTGCTCG ACGAGCCGAC CAACCACCTC
GACCTCGACG CCATCCTCTG GCTGGAGGAG TGGCTCAAGG GCTATCCCGG CACGTTGCTG
CTGATCTCCC ACGACCGTGA TTTCCTCGAC GCCGTGGTCG ACCATGTGGC GCACCTGGAG
CAGCAGAAGC TGACCCTCTA CCGCGGCGGC TACTCGGCCT TCGAGCGCAC CCGCGCCGAG
CGTCTGGCGC AGCAGCAGCA GGCGTACGAG AAGCAGCAGG CGCAGCGTGC GCACATGGAG
GACTTCATTC GCCGCTTCAA GGCCAAGGCG ACCAAGGCAC GCCAGGCACA GAGCCGCATC
AAGGCGCTTG AGCGCCTGGA AGAGCTGGCC CCGGCCCATG TCGACTCGCC CTTCGACTTC
GTCTTTCGCG AGGCGGACAA GGTCTCCAGC CCGCTGCTCA ACCTGTCCGA GGCGCGCCTG
GGTTACGGCG ACAAGACGGT GCTGGAGAAG GTCAAGCTGA GCCTGGCACC CGGTGCACGT
ATCGGCCTGC TCGGCCCCAA CGGCGCGGGC AAGTCGACCC TGATCAAGAC CCTGGCCGGC
GACCTGGCCG TGCTCGGCGG CGAGCTGGCC CGTGGCGAGA ACCTGGCCAT CGGCTACTTC
GCCCAGCATC AGCTCGATGC CCTGGACCCC AAGGCCAGCC CGCTGCTGCA TCTGCAGCGC
CTGGCGCCGA GCGAGCGCGA GCAGACACTG CGCGACTTCA TCGGCGGCTT CGATTTCCGT
GGCGAGCGCT GCGACGAGCC GGTGCTGAAT TTCTCCGGCG GCGAGAAGGC GCGCCTGGCC
CTGGCGCTGA TCGCCTGGCA GAAGCCCAAC CTGCTGTTGC TGGACGAACC GACCAACCAC
CTCGATCTGG AAATGCGCCT GGCGCTGACC ATGGCCCTGC AGGAATTCGC CGGGGCGGTG
CTGGTGGTCT CCCACGACCG TCACCTGCTG AAGAGCACCA CCGACGAGTT CCTTCTGGTG
GCCGACGGGC GCATCCAGCC GTTCGAGGGC GACCTGGACG ACTATGCGCG TTGGCTGATC
GACTTCCGCG CCCGCCAGCA GCCGGTCGCA GCGCCGGCCG CCGGTGCCGA GAAGACCGAC
AAGCGCGCCC AGCGCCAGGC CGCTGCGGCG CTGCGCCAGC AACTGGCACC GCACAAGAAG
CAGGCCGACA AGCTCGAGCA GGAGCTGGGC AAGGTGCAGG AAAAGCTCGC CGCCGTGGAA
GCCCAGCTGG GCGACAGTGG CCTGTACGAG TCCGCACGCA AGGATGAGCT GCGCGAGCGC
CTCGCCGAGC AGGCGCAGCT CAAGGCGCGC GAGGCCGAGC TGGAGGAAGC CTGGCTGCTG
GCCCTGGAAA CCCTGGAGGC GTTGCAGCAG CAACTGGAGG AGGCCGAGTG A
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| Protein sequence | MIRLQNLTLQ RGPQRLLEGA ELTLHAGQKV GLIGANGAGK SSLFALLRGE LGPDAGDCQL
PPDWRIAHMR QEVDNLERLA VDYVLDGDVH LRAIQAELAR AEAAHDGSAI ARLHSELDNA
QGYSADSRAR KLLAGLGFTS EQMDRRVGDF SGGWRMRLNL AQALMCPSEL LLLDEPTNHL
DLDAILWLEE WLKGYPGTLL LISHDRDFLD AVVDHVAHLE QQKLTLYRGG YSAFERTRAE
RLAQQQQAYE KQQAQRAHME DFIRRFKAKA TKARQAQSRI KALERLEELA PAHVDSPFDF
VFREADKVSS PLLNLSEARL GYGDKTVLEK VKLSLAPGAR IGLLGPNGAG KSTLIKTLAG
DLAVLGGELA RGENLAIGYF AQHQLDALDP KASPLLHLQR LAPSEREQTL RDFIGGFDFR
GERCDEPVLN FSGGEKARLA LALIAWQKPN LLLLDEPTNH LDLEMRLALT MALQEFAGAV
LVVSHDRHLL KSTTDEFLLV ADGRIQPFEG DLDDYARWLI DFRARQQPVA APAAGAEKTD
KRAQRQAAAA LRQQLAPHKK QADKLEQELG KVQEKLAAVE AQLGDSGLYE SARKDELRER
LAEQAQLKAR EAELEEAWLL ALETLEALQQ QLEEAE
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