Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0272 |
Symbol | |
ID | 5110242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 280155 |
End bp | 280955 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501489 |
Product | lipase, class 3 |
Protein accession | YP_001185778 |
Protein GI | 146305313 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTC TGCCCCTGTA TTTCCCGCCC ACCTATCAGC TAGCGCGCGC CCAGCGCTGT GCCGAGCTGG TGATACTCGC GTACGATCAG TACGCGCAGT GGCTGGCGCA GCAGCGCCCG CGCAAGCCCC AGCAGTTTCA CTGGCAGCCG CCTCAGCAGG CCGGCTGGCA GCTGTCCGCA CCGATCTGGA GCATCCTCAG CGAGTGGTAC GTGCTCGACG AGTCGGAGCC GTTCGGCTTT GCCGCGCGCG ATGCGCAGGG CGACTGCTAT CTGGTGTTCC GCGGTACCGA GTCGGTGCAG GACTGGCTCG ATGACCTCGA TCTGGATCAG CGCGCCTACC CCTGGCAGGC CGGCGGCGGC CTGGTGCACG ACGGTTTCCT CAAGCTGTAT GCGTCCCTGC GCGACCAGGC GTTGCTGGCG CTGGAACAGC TGCAGCCACA GGGCATGCTC TGGGTCTGCG GCCACAGCCT GGGCTGTGCG CTGAGCAGCC TGGCGGTACC GGATCTGCGG CGGCGCTGGC CCTTTCTGGC GCTGCAGCAC TACAACTTCG CCAGCCCGCG GCTGGCCTCG CCGGCGTTCG CCAACTACTA CAACGCGCTG GCCGTGCCCA CCTATCGGCT GGTCAACGAC AGCGACCTGG TGCCGGAGCT GCCGCCGGCG GACAGCGATG GCTGGCTCTA CCAGCATCTC GGCCTGGCGG TGACCTTCAC CGCCAGTTAC GCAGGGGTTG CCGACAATCA CAGCATGGGC GGCTGTTATC TCTTCGCGCT GAACAATCCG CAGTCGCCAA TGCGCGGCTA G
|
Protein sequence | MSSLPLYFPP TYQLARAQRC AELVILAYDQ YAQWLAQQRP RKPQQFHWQP PQQAGWQLSA PIWSILSEWY VLDESEPFGF AARDAQGDCY LVFRGTESVQ DWLDDLDLDQ RAYPWQAGGG LVHDGFLKLY ASLRDQALLA LEQLQPQGML WVCGHSLGCA LSSLAVPDLR RRWPFLALQH YNFASPRLAS PAFANYYNAL AVPTYRLVND SDLVPELPPA DSDGWLYQHL GLAVTFTASY AGVADNHSMG GCYLFALNNP QSPMRG
|
| |