Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0232 |
Symbol | |
ID | 5106199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 239295 |
End bp | 240617 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501449 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_001185738 |
Protein GI | 146305273 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC GACCACTCGC CGGGGACGGC CATGAGGACA CCATGAGCAA GACCAACGAA TCCCTGCTGC AACGCCGTGC CGCCGCCGTA CCGCGCGGTG TCGGCCAGAT CCACCCGATC GTCGCCGAGC GCGCCGAGAA CGCCACCGTG TGGGACGTCG AAGGCCGCGA GTACATCGAC TTCGCCGGCG GCATCGCCGT GCTGAACACC GGCCACCTGC ATCCGAAGGT GGTCGCCGCC GTTCAGGAGC AGTTGACCAA GCTGTCGCAC ACCTGCTTCC AGGTGCTGGC CTACGAGCCC TACATCGAGC TGTGCGAAGA GATCGCCAAG CGCGTGCCGG GCAACTTCGC CAAGAAGACC CTGCTGGTCA CCTCCGGCTC CGAAGCCGTC GAGAACGCCG TGAAGATCGC CCGCGCCGCC ACTGGCCGCG CCGGCGTGAT CGCCTTCACC GGCGCCTACC ACGGCCGCAC CATGATGACC CTGTCGCTGA CCGGCAAGGT GGTACCGTAC TCCGCCGGCA TGGGCCTGAT GCCCGCTGGC GTGTACCGCG CCCAGGCACC GTGCCCGCTG CATGGCGTGA GCGAGGACGA GTCCATCGCC AGCATCGAGC GCATCTTCAA GAACGACGCG CAGCCGCAGG ACATCGCCGC GATCATCATC GAGCCGGTGC AGGGCGAGGG CGGTTTCTAC GTCAACTCCC CGGCCTTCAT GCAGCGCCTG CGCGCGCTGT GCGACCAGCA CGGCATCCTC CTGATCGCTG ACGAAGTGCA GACCGGCGCG GGCCGTACCG GCACCTTCTT CGCCACCGAG CAACTGGGCG TGGTGCCGGA CCTGACCACC TTCGCCAAGT CCGTCGGCGG CGGCTTCCCG ATCTCCGGCG TGTGCGGCAA GGCCGAGATC ATGGACAAGA TCGCCCCCGG TGGCCTGGGC GGCACCTACG CCGGCAGCCC GATCGCCTGC GCCGCGGCCC TGGCCGTGCT CAAGGTGTTC GACGAGGAGA AACTGCTGGA GCGCAGCCAG GCCGTGGGCG AGAAGCTCAA GGCCGGCCTC AAGACCATCG CCGAGAAGCA CAAGGTGATC GGTGACGTAC GTGGCCTGGG TTCGATGGTC GCCATCGAGC TGTTCGAAGG CGGCGACCAC AGCAAGCCGG CGGCCGAGCT GGTGGGCAAG ATCGTCGCCC GTGCGCGCGA GAAGGGCCTG ATCCTGCTGT CGTGCGGCAC CTACTACAAC GTCATCCGCT TCCTGATGCC CGTCACCATC CCGGACGCGC AACTGGAAAA AGGCATCGCC ATCGTCGCCG AGTGCTTCGA CGAGCTGGCC TGA
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Protein sequence | MLNRPLAGDG HEDTMSKTNE SLLQRRAAAV PRGVGQIHPI VAERAENATV WDVEGREYID FAGGIAVLNT GHLHPKVVAA VQEQLTKLSH TCFQVLAYEP YIELCEEIAK RVPGNFAKKT LLVTSGSEAV ENAVKIARAA TGRAGVIAFT GAYHGRTMMT LSLTGKVVPY SAGMGLMPAG VYRAQAPCPL HGVSEDESIA SIERIFKNDA QPQDIAAIII EPVQGEGGFY VNSPAFMQRL RALCDQHGIL LIADEVQTGA GRTGTFFATE QLGVVPDLTT FAKSVGGGFP ISGVCGKAEI MDKIAPGGLG GTYAGSPIAC AAALAVLKVF DEEKLLERSQ AVGEKLKAGL KTIAEKHKVI GDVRGLGSMV AIELFEGGDH SKPAAELVGK IVARAREKGL ILLSCGTYYN VIRFLMPVTI PDAQLEKGIA IVAECFDELA
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