Gene Pmen_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0190 
Symbol 
ID5106870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp192934 
End bp193410 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID640501406 
Producthypothetical protein 
Protein accessionYP_001185696 
Protein GI146305231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.952719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC CGCGCGTCCT CCTGCTGCTG GTTATCTTCA ACACCCTGGT GGTGGTTGGC 
GGCACCATCT TCAACTACGC CACGCTCAAG TCCATGCAAA CCGGCCAGGC GGTGCTCGGC
ATTTCCGTCG GCAGCGCCGG CAGCGAAGCC GAGGAAGCCA AGAGCGAATA CCGCTTCTTC
CCCATCGAGA AGGTCATCGT CAGCCTGCAG GGCGAGAGCC GCGAGCACTA CTTCGTGCTG
GACCTGGTGC TGCAGGCCGA CCTGGAGACC GACCCGAAGA AGCTCGAACA GATCGACCCG
ATGGTGCGCA ACTCGGTGGT GGCACACCTG TCCGCGATGA GCTTCGAGAA GCTGCGCGGC
ATGCCCATCC CCGAGTTGCA GAGTGCCCTG GAGCGGGCAC TGTTCGATGA CTTCGCCAGC
AAGAAACTGG CGATGCCGTT CGCCAACGTG CTGGTCAGCA AGCTGATCGT CCAGTAA
 
Protein sequence
MTMPRVLLLL VIFNTLVVVG GTIFNYATLK SMQTGQAVLG ISVGSAGSEA EEAKSEYRFF 
PIEKVIVSLQ GESREHYFVL DLVLQADLET DPKKLEQIDP MVRNSVVAHL SAMSFEKLRG
MPIPELQSAL ERALFDDFAS KKLAMPFANV LVSKLIVQ