Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0172 |
Symbol | |
ID | 5106852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 173018 |
End bp | 174205 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501388 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001185678 |
Protein GI | 146305213 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAAGGA AGATTGAAGC CAAGGTGCTG ATCGTCGACG ACCTGCCGGA GAACCTGCTG GCCCTGCGCT CGCTGATCCA GAGCGACGAT CGCACGCTGT TCCAGGCCAG CAGCGCCGAC GAGGCGCTGT CGCTGATGCT CGAGCATGAG TTCGCCCTGG CCATCCTCGA TGTGAAGATG CCGGGCATGA ATGGTTTCGA ACTGGCCGAG CTGATGCGCG GAACGGAGAA GACCCGGCAT ATCCCGATCA TCTTCGTCAG CGCCGTCGGC CGCGACATGG ACTATGCCTT CAAGGGCTAC GAGAGCGGCG CCGTGGATTT CCTGCACAAG CCGCTGTCGC CCTTCGAGGT GCGCAGCAAG GTGTCGATGT TCGTCGAGCT GTACCGTCAC CGCAAGGCGC TGAGCCAGCA GCTGGAAGTG CTCGAGGCCG CGCGGCGCGA ACAGGAGGCC CTGCTCACCG AGCTGCGCGA GACCCAGGCC GAGTTGCAGA AGGCGGTGCA GATGCGCGAC TCGTTCATGT CCATCGCCTC CCACGAGCTG CGTACCCCGC TCAATGGCCT GATCCTCGAC GTGCAGCTGC GCAAGCTGCG CCTGGAGCAG GGCCGCACGG ATGCCTTCAC CCCGGACAAG CTGCACGAGA TGATCGCCCG CGACGAGCGA CAGATCCGCA GCCTGAGCCG CCTGATCGAC GACATGCTGG ACGTGTCGCG CATTCGCACC GGCAAGCTTT CGGTGATACC CCAGCCGGGA GACCTCGGCG TACTGGCCGG CAACGTCGTG GAGGGTCTGG CCGCGCAGTT CGCCAGTCAG GGCAACCACA TCGACCTGCA GGTGGACGGC CCCGCGCCGG TGATGATGGA CGAGTTCCGC ATCGAGCAGG TGCTGGCCAA CCTGCTGACC AACGCCCTGC GCTACGGAGG CGGCAAGCCC GTGCTGGTGC GGGTCAGCAG CGAGGGCGAG ATCGTCCGCG CCGAGGTGCG CGACCAGGGC ATGGGCATTT CCGAAGCGGA CCAGCGACGG GTGTTCGAGC AGTTCGAGCG GGTCTGCGAC GCCGGTGTCG CCCAGGGGCT CGGGCTCGGC CTGTTCATCA GCGAGCAAAT CGTGCAGGCC CACGGAGGGC GCATCGAACT GAGCAGCCGC CTGGGTGAGG GCTCCTGCTT CAGCGTCCTG CTACCGCGCC GCGTCTGA
|
Protein sequence | MLRKIEAKVL IVDDLPENLL ALRSLIQSDD RTLFQASSAD EALSLMLEHE FALAILDVKM PGMNGFELAE LMRGTEKTRH IPIIFVSAVG RDMDYAFKGY ESGAVDFLHK PLSPFEVRSK VSMFVELYRH RKALSQQLEV LEAARREQEA LLTELRETQA ELQKAVQMRD SFMSIASHEL RTPLNGLILD VQLRKLRLEQ GRTDAFTPDK LHEMIARDER QIRSLSRLID DMLDVSRIRT GKLSVIPQPG DLGVLAGNVV EGLAAQFASQ GNHIDLQVDG PAPVMMDEFR IEQVLANLLT NALRYGGGKP VLVRVSSEGE IVRAEVRDQG MGISEADQRR VFEQFERVCD AGVAQGLGLG LFISEQIVQA HGGRIELSSR LGEGSCFSVL LPRRV
|
| |