Gene Pmen_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0167 
Symbol 
ID5106847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp166883 
End bp167545 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID640501383 
Producthypothetical protein 
Protein accessionYP_001185673 
Protein GI146305208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTG CCAACCCGCT TTGCCTTCTG TTTGCTGGCT TGCTGCTGAG CGGTTGCGCC 
AGCCAGACCA CCAGCCCCAC GCAGTTTTCG GGCTACCTCG CCGATTATTC GCAGCTCCAG
CCGGCCACCT CGGCCACCGG CGCGCCCGTG CTGCGCTGGA TCTCGCCGCA GTTCAAGGCC
GAAAGCTACA GCGCGGTGTA CATCGAGAAA CCCACCTTCC ATCCCCAGCC CGTACCCAAC
GAGCAGATCA GCGCACAAAC CCTGGAGGAG GTGCGCAATT ACCTGCATCA GGCGTTGATA
CGCGAAGTGC AGGGGCGCAT GAAGGTGCTC AGCGAACCGA CCATGGACAG CCTGGTATTG
CGCAGCGCCA TCACCGGCGT GACAGTGACC ACCGAAGGGC TCAAGGCCTA CGAGGTGATC
CCCGTCGCCC TGGTCGTGGC GGCCGCGACA ACCGCCGCGG GCACCCGCGA CCGCGACAGC
GAGATCTTCA TCGAACTGGA GGCGCTGGAC GCCCGCAACA GCGAGCCGAT GGTCCGGGTG
GTGCGCAAGG GCCATGGCCT GACGCTGGAA AACAGCAGCA CCCAGCTCAC GCTGGATGAC
CTTAAGCCGG TGCTCGACAG CTGGGCACGG GACGCGCGGG ACTTCCACCC AGGGCTGCGC
TGA
 
Protein sequence
MRRANPLCLL FAGLLLSGCA SQTTSPTQFS GYLADYSQLQ PATSATGAPV LRWISPQFKA 
ESYSAVYIEK PTFHPQPVPN EQISAQTLEE VRNYLHQALI REVQGRMKVL SEPTMDSLVL
RSAITGVTVT TEGLKAYEVI PVALVVAAAT TAAGTRDRDS EIFIELEALD ARNSEPMVRV
VRKGHGLTLE NSSTQLTLDD LKPVLDSWAR DARDFHPGLR