| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0165 |
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| Symbol | |
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| ID | 5106845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 165579 |
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| End bp | 166361 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501381 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001185671 |
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| Protein GI | 146305206 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTT TCAGCCTTGC CCTGCTTCTT GTCCTGCTCG CCGGTTGCAC CGGCGGGCTG
CGCATCGACG ACAGCCACAC CGCAACGGGG CAGAACAGCC GCGTGCAGTA CGTGGTGCTG
CACTACACCT CGGCCGATCT GCAGCGTTCG CTGAATCTGC TGACGCAGAC CGAGGTGAGC
AGCCATTACC TGATCGGCGA CGCGCCGCCG ACCGTCTACC GTCTGGTGGA CGAGAACCGC
CGCGCCTGGC ACGTCGGCGT CAGCGAGTGG CAGGGGCGGA CCTGGCTCAA CGCGTCGACC
ATCGGCATCG AGCTGGTCAA CCAGGGGTAC TACGAGACCC CGGCCGGTCG TTACTGGCAG
CCGTTCGCCC CGCAACAGAT CGACACCCTG ATCGTGCTGC TTAAGGACAT CGTGCAGCGC
CACCAGCTGC CGCTGGGCTC GATCATCGCC CACAGCGACG TGGCGCCGCA GCGCAAGGTC
GATCCGGGGC CGCTGTTCCC CTGGAAGCGG CTGGCTGACG AAGGCCTGGT GCCCTGGCCG
GACGAGGCGC GGGTGGCGCG GCAGCAGGCG CTGTTCGCCA TCAGCCTGCC CGGCATCGAG
TGGTTCCAGG AGCAGCTGGC GCAGCAGGGC TATACCGTGC CCCGGCATGG CGAGCTGGAC
GAAGCCACGC GCAATGTCAT TGCCGCCTTC CAGATGAAGT ACCGCCCGGC CAACTACGAT
GGCCAACCGG ACGCCGAAAC CGCAGCGCGG CTGCTGGTGC TCAACCAGCA GGCGGCGGGT
TAG
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| Protein sequence | MKSFSLALLL VLLAGCTGGL RIDDSHTATG QNSRVQYVVL HYTSADLQRS LNLLTQTEVS
SHYLIGDAPP TVYRLVDENR RAWHVGVSEW QGRTWLNAST IGIELVNQGY YETPAGRYWQ
PFAPQQIDTL IVLLKDIVQR HQLPLGSIIA HSDVAPQRKV DPGPLFPWKR LADEGLVPWP
DEARVARQQA LFAISLPGIE WFQEQLAQQG YTVPRHGELD EATRNVIAAF QMKYRPANYD
GQPDAETAAR LLVLNQQAAG
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