| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0157 |
|---|
| Symbol | |
|---|
| ID | 5106837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 157010 |
|---|
| End bp | 157615 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501373 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_001185663 |
|---|
| Protein GI | 146305198 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.71333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG TACTCGTGAG TCTGCTGTTG ACCCTGGGCC TCACCGGCGT GGCACAGGCT
GCTGGCGATG CCGAAGCCGG TCAGGGCAAA GTCGCTGTCT GTGGTGCCTG CCATGGTGCC
GATGGCAACA GTCCCGCGCC AAACTTCCCC AAGCTGGCCG GTCAGGGCGA GCGCTACTTG
CTCAAGCAGC TGCACGACAT CAAGTCCGGC GCGCGTCCGG TGGTCGAGAT GACCGGCATG
CTGGACAACC TCAGCGATCA GGACATGGCC GATATCGCCG CCTACTTCGC CAGCCAGCAG
ATGAGCGTCG GCGCTGCCGA TCCGAAGCTG GTCGAGCGCG GTGAAGCGCT GTTCCGCGGC
GGCAAGCTGG AAGAGGGCAT GCCGGCCTGC ACCGGTTGCC ATTCGCCTGA TGGTGCCGGT
CTGGCCGCCG CTGGTTTCCC GAAACTGGGT GGCCAGCACG CCGCCTACGT GGCCAAGCAG
CTGACCGATT TCCGCGAGGG TGATCGCACC AACGACGGCG ACGCGATGAT CATGCGTGCC
ATCGCTGCCA AGCTGAGCAA CAAGGATATC GAGGCGGTTT CCAGCTTCAT CCAGGGTCTG
CACTAA
|
|---|
| Protein sequence | MNKVLVSLLL TLGLTGVAQA AGDAEAGQGK VAVCGACHGA DGNSPAPNFP KLAGQGERYL
LKQLHDIKSG ARPVVEMTGM LDNLSDQDMA DIAAYFASQQ MSVGAADPKL VERGEALFRG
GKLEEGMPAC TGCHSPDGAG LAAAGFPKLG GQHAAYVAKQ LTDFREGDRT NDGDAMIMRA
IAAKLSNKDI EAVSSFIQGL H
|
|---|
| |