| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0142 |
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| Symbol | |
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| ID | 5106822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 142477 |
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| End bp | 143601 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501358 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001185648 |
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| Protein GI | 146305183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAC ATCCACGAGT CTGGATGGGC CTCCTGCTGT GGCTGGCATT AGGCTCGGCG
CATGCCCAGT GGACGGTGAA CATGGCACCC GGTGTTACCG AGGTCAGCCG CTCCGTCTTC
GATCTGCACA TGACCATCTT CTGGATCTGC GTCGTGATCG GCGTGATCGT CTTCGGCGCC
ATGTTCTGGT CGATGATCAT GCACCGCCGC TCCACCGGGC AGGAGCCCGC GCACTTCCAC
GAAAGCACCA CGGTGGAAAT TCTCTGGACC GTCGTGCCAT TGGCCATTCT GGTGCTGATG
GCGATACCGG CGACCAAGAC GCTGATCGAG ATCTACGACA CCTCCGAGTC CGAGTTGGAT
ATCCAGGTCA CCGGCTACCA GTGGAAATGG CACTACAAGT ACCTGGGCCA GGACGTGGAG
TTCTTCAGCA ACATGTCCAC GCCGCGTAGC CAGATCAACA ACCGCGAAGC CAAGGGCGAG
CACTACCTGT TGGAGGTGGA CGAGCCGCTG GTGGTGCCGG TGGGCACCAA GGTGCGCTTT
TTGATCACCG CCGCCGACGT GATCCACTCC TGGTGGGTGC CGGCGCTGGC AGTGAAGAAG
GACGCCATCC CCGGCTTCAT CAACGAGTCC TGGACGCGCA TCGAGGAGCC CGGCATCTAC
CGTGGCCAGT GCACCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGGT GGTGGTCGAA
GCCAAGTCCA AGGAGGACTT TGCCGTCTGG CTGGCCGAAC GCAAGGAGGC CGCCGCCGCC
GAGCGTGAGC TGACCAGCAA GGAATGGACC ATGGAAGAGC TGATGGCGCG TGGCGAGAAG
GCCTACCTCA CCGCCTGCGC CGCCTGCCAC CAGCCCGGTG GCGAGGGGCT GCCGCCGATG
TTCCCGGCAC TCAAGGGTTC GGCCATCGCC ATGGGCCCGG CCGAGGGCCA TATCGACATC
GTCTACAACG GCAAGCCGGG CACCTCCATG GCCGCCTTCG GCAAGCAGCT GTCGCCGGTC
GACCTGGCCG CCATCATCAC CTACGAGCGC AACGCCTGGG GCAACAAGGT CGGTGACATG
GTCACGCCCA AGGACATTCT CGACTTCTCG AAGGCTCAGG AGTAA
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| Protein sequence | MMRHPRVWMG LLLWLALGSA HAQWTVNMAP GVTEVSRSVF DLHMTIFWIC VVIGVIVFGA
MFWSMIMHRR STGQEPAHFH ESTTVEILWT VVPLAILVLM AIPATKTLIE IYDTSESELD
IQVTGYQWKW HYKYLGQDVE FFSNMSTPRS QINNREAKGE HYLLEVDEPL VVPVGTKVRF
LITAADVIHS WWVPALAVKK DAIPGFINES WTRIEEPGIY RGQCTELCGK DHGFMPVVVE
AKSKEDFAVW LAERKEAAAA ERELTSKEWT MEELMARGEK AYLTACAACH QPGGEGLPPM
FPALKGSAIA MGPAEGHIDI VYNGKPGTSM AAFGKQLSPV DLAAIITYER NAWGNKVGDM
VTPKDILDFS KAQE
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