| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0130 |
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| Symbol | |
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| ID | 5106810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 131600 |
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| End bp | 133072 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501346 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001185636 |
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| Protein GI | 146305171 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCT CGCCCGCCTT GCCATTCGAC CTTTCCGGCA TTCATCTGCA GCCCGGCCAA
GGGCTGGCGC GCCAGCTCTA CCAGGCCTTG CGCGAGCGCA TCCTCGACGG TCGCCTGGCC
GGTGGCACAC GCCTGCCGGC CAGCCGTGAG CTGGCCGCGC TGCTTGGTAT CTCGCGCAAT
ACCGTGACCC GCGCGCTGGA CCAGCTGTAT GCCGAGGGCT ACGTGAACGG GCGGGTCGGC
GATGGCACCT ACGTCGCCGA GCTGACACGC CACCGGCCTG CCCCGGTGCC GGTGGCAGCC
GTCGCCCCGA CAGCGGCCAG CCCGGCAATG CAGCTGTTGC ACAACCATCA CCTGGCGATG
CCCGCCGCGG GCGCACCGCG CGCCTTTCGC ATCGGCGTGC CGGCTTTCGA CCTGTTCCCC
TTCGAGACCT GGTCACGCCT GCAGGTGCGC TTCTGGCGCA AACCCTCGCT GGCACGGCTG
GGCTATGGCG ACCCTGCCGG TGACCTGCAG CTGCGCGAGC TGATCGCCGC CTACCTGCGC
AACAGCCGCG GCCTGACCTG CGAGGCGCCG CAGGTACTGA TCACCTGCGG CTCGCAGCAG
GCCATCAGCC TCTGCGCGCA GTTGCTGATT CAACCGGGCG AGCGCGTGGC CATCGAAAAC
CCCGGCTACC GCGCGGCGGG CCATGCCTTC GCGGTGGCCG GCGCGCAGCT GTGCGGCGTG
GCGGTAGACG GCGATGGCCT GGACGTCGAC GCCCTGCAGC GTCTGAACGA GTGCCGGCTG
GCCTATGTCA CGCCCGCGCA TCAATACCCC ACCGGCGTCA CCCTGTCGCT GCCCAGGCGC
CTGGCCTTGC TGGAGTGGGC CAAGCGCGTC AACGGCTGGA TCATCGAGGA CGATTACGAC
GGCGAGTACC GCTACAGCGG TACGCCACTC GCGCCACTGG CAGCGCTGGA TGAGCAGCAG
CGGGTGATCT ACATCGGCAC CTTCGGCAAG CTCGCCTTCC CGGCGCTGCG CCTGGGGTAT
CTGGTGCTGC CGCCGGCGCT GGCCGAGAGC TTCGCGAGGC GCCAGGCGCT GGAGATACGC
CACTCGGAGG TCGGCACCCA GGCGGTGATG GCCGAGTTCA TCGCCGCCGG GCACTTCCAG
CGCCATGTGC GGCGCATGCG TCAGGCTGCG CGCAGCCGCC GCGACGCCCT GATCGAGGCC
TGGCCGCAGG CGATTCCCGG ATGCTCACCG TTGCCGGCGG TTGAGGCCGG CCTGCACCTG
AGCATCAGGG TCGAGAGCCT GGCCCGTGAG CGTGAGCTGA TCGGCTCCGC ACGCGCAGCC
GGTATCGAGA TGAACCCCTT GAGCGGTTAC TGGCTACCCG GCAGCGATAC GGCTGAAGAC
GCCCGCGCCG GGCTGGTGCT GGGCTTTGCG GCAGTGCCCG AGGCGCAGAT CGTCGAGGCG
GTGCAGACGC TACGCCGGGC TTGGAAGCTG TAA
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| Protein sequence | MRRSPALPFD LSGIHLQPGQ GLARQLYQAL RERILDGRLA GGTRLPASRE LAALLGISRN
TVTRALDQLY AEGYVNGRVG DGTYVAELTR HRPAPVPVAA VAPTAASPAM QLLHNHHLAM
PAAGAPRAFR IGVPAFDLFP FETWSRLQVR FWRKPSLARL GYGDPAGDLQ LRELIAAYLR
NSRGLTCEAP QVLITCGSQQ AISLCAQLLI QPGERVAIEN PGYRAAGHAF AVAGAQLCGV
AVDGDGLDVD ALQRLNECRL AYVTPAHQYP TGVTLSLPRR LALLEWAKRV NGWIIEDDYD
GEYRYSGTPL APLAALDEQQ RVIYIGTFGK LAFPALRLGY LVLPPALAES FARRQALEIR
HSEVGTQAVM AEFIAAGHFQ RHVRRMRQAA RSRRDALIEA WPQAIPGCSP LPAVEAGLHL
SIRVESLARE RELIGSARAA GIEMNPLSGY WLPGSDTAED ARAGLVLGFA AVPEAQIVEA
VQTLRRAWKL
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