| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0100 |
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| Symbol | |
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| ID | 5106285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 97281 |
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| End bp | 98477 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501316 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001185606 |
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| Protein GI | 146305141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGG TATTCGAGAT GGTCAGCGCA CAGCAGTTCG TGCCGGGTCT GCTGACCACC
AAGACCTTCA AACAGGCTGG CGGCGTGATC GGTCGCGCCG AGGATTGCGA CTGGGTGATC
CCCGATCGCA AGCGCATCCT CTCCAGCCGT CATGCCGAGG TCAGCTATCG CGATGGCGCC
TTCTACCTGA CCGACACCAG CAGCAACGGC ATCGCCCTCA AGGACAGCGG CGCCAGCCTG
GCCAAGGGCC GCCCGCAGCG TATCGAGCAC GGCAGCGTGT ACTGCCTGGG CGACTTCGAG
ATTCGCGCAC GGCTGATTCA GGATCCGGCC ATGTTCGAGG GCGATATCGG CCTGCCGCAG
GCAGCCGGCA GCATCATCCC CGACGACGCC TTCCTCGACC TCGACCCGCT CACCGCGCTG
GAGCAGCAGG AGCGCGTCTA CGCCGAGGTG GACGATCTGA CCGCCGTGCT GCGCCCCAGC
ACCGCCCAGG CGCAGCAGCG CGACTACGCG CAGATCGACG AGGAAAACCT GCTGGTGCCC
GAGCTGGTGA TGCCGACGCC GCCGGCCCAG CCGAAACCCG CGCCGGAGCC CGAGCGCCTG
CCGCCGAGCT TCTGGGAAAA GTTCGCCGAT GCCCTCGGCG TGCGCCTCGA CGATCTCGAT
GACGATGCCC GCGAAGCCCT GGCGCTCAAT GCCGCCAAGC TGCTCAGGCA GAGCGTCGGC
AGCCTGCAGC AGGCCCTGCG CACGCGCGGC GAGCTGAAGA ACGAGCTGCG TCTGGCCCTG
ACCACCGTGC AGGGCGCCGG TAACAACCCG CTCAAGCACG GCCTGGATAG CGGGGAGACG
CTGACCGCCC TGCTGCGTGG CGGCAAACCC GGTCAGCTGC CTGCCGAGCA GGCCATCAGC
CGCGGCTTTC GCGACCTGCA GGCGCACCAG GTGGCGTTGC TCGCCGCCAG CCGCGCGGCG
GTCAAGGGCA TGTTCGAGCA GTTCGCCCCG GAGCAGCTGG CCATGCGCTT CGAACGCAAC
GGCCGCAAGC CGCTGCTCGC CACCGCCGGC AGCCGCTGGC GCGCCTACCG CCGCCTGCAT
GCGGATCTGG CGCAGAACGA CGACTGGAGC GACCGCCTGT TCACCCGCGA TTTCGCCAGT
GCCTACGAAG AGCAGGTTCG CCTGATCGCC ACCCTCAATA CCGACCTTCA AGGATGA
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| Protein sequence | MELVFEMVSA QQFVPGLLTT KTFKQAGGVI GRAEDCDWVI PDRKRILSSR HAEVSYRDGA
FYLTDTSSNG IALKDSGASL AKGRPQRIEH GSVYCLGDFE IRARLIQDPA MFEGDIGLPQ
AAGSIIPDDA FLDLDPLTAL EQQERVYAEV DDLTAVLRPS TAQAQQRDYA QIDEENLLVP
ELVMPTPPAQ PKPAPEPERL PPSFWEKFAD ALGVRLDDLD DDAREALALN AAKLLRQSVG
SLQQALRTRG ELKNELRLAL TTVQGAGNNP LKHGLDSGET LTALLRGGKP GQLPAEQAIS
RGFRDLQAHQ VALLAASRAA VKGMFEQFAP EQLAMRFERN GRKPLLATAG SRWRAYRRLH
ADLAQNDDWS DRLFTRDFAS AYEEQVRLIA TLNTDLQG
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