| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0097 |
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| Symbol | |
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| ID | 5106282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 92959 |
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| End bp | 95559 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501313 |
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| Product | ATPase |
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| Protein accession | YP_001185603 |
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| Protein GI | 146305138 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACG TCGACCTGCA ACAACTGGTT CAAGCTCTGG ACGCCGCGAG CAAGCGCGAC
CTGGAGATGG CCGCCGAACG CTGCGTGGTA CGCGGCGGCA ACAAGATCCT CGTCGAGGAC
CTGCTGCTGG GTCTGCTCGA GCGCCCGGAA AGCCTGCTGG CGCGTGCCCT GCAGGATGCC
GAGATCGATG CCGGCGAGCT GGCCCAGGCG CTGCAGCCGC GCGGCGAGCA CAGCGAGTCG
CGCAACCCGG TGTTTTCTGC CGAACTGGTG CAGTGGCTGC AGGACGCCCT GCTGGTGGCC
AACCTGGAGC TGGGCGCCAG CCAGATCGAC CAGGCCGCGC TGATCCTCGC CCTGCTGCGC
AACCCCATGC GCTACGCCGG CAGCCGTTAT CAGACGCTGC TGAGCAAGCT CAATGCCGAG
CGTCTGCGCG ACTTCGCCCT TAGCCAGCAG CCGCAGGCCG CGGGCGGCAA AGCGGCGGCG
CCGGGCGAGT CGAACCTGGC GCGCTTTACC CACAACTTCA CCCAGCAGGC CCGCGACGGC
AAGCTCGATC CGGTGCTGTG CCGCGACGGC GCGATCCGCC AGATGGTCGA TATCCTCGCC
CGCCGGCGCA AGAACAACCC CATCGTGGTC GGCGAGGCCG GGGTGGGCAA GACCGCCATC
GTCGAGGGCC TGGCCCTGCG CATCGCCACC GGCGAGGTAC CGCAGGTGCT CAAGGGCGTC
GAGCTGCTGT GCCTGGACCT CGGCCTGCTG CAGGCCGGCG CCAGCGTCAA GGGCGAGTTC
GAGCGCCGCT TGCAGGGCGT GATCGACGAG GTCAAGGCCT CGCCCAAGCC GATCATCCTG
TTTATCGACG AGGCCCATAC GCTGATCGGG GCCGGTGGCC AGGCCGGCAG CGGCGATGCC
GCCAACCTGC TCAAGCCGGC GCTGGCCCGT GGCGAGCTGC GCACCATCGC CGCCACCACC
TGGAGCGAAT ACAAGAAGTA CTTCGAGAAG GACCCGGCGC TGGCCCGTCG CTTCCAGCCG
GTGCAACTGC ACGAGCCGAC CGTCGACGAG GCGGTGACCA TCCTGCGCGG CCTGGCGCCG
GTGTACGAGA AGAGCCACGG CATCTACCTG CGCGACGACG CCGTGGTCGC CGCCGCCGAG
CTGTCGGCGC GCTACCTGGC CGGTCGCCAG TTGCCGGACA AGGCGGTGGA CGTACTCGAC
ACCGCCTGCG CCCGCGTGCG CATCAGCCTG GCCGCCGCAC CCGAGGCGCT GGAGCGCCTG
CGCGGCGAGA TCGCCGAGGG CGAGCGCCAG GGCGAGGCCA TGCGCCGCGA CCTGGACGCT
GGCCTGAGCA TCGACGGCGA AGCGCTGGAT GCCCTGGAAA CCCGCCTGGT CGCCGCGCGC
GCCGAACTGG AGCAGGTGGA AACCCGCTGG GCGATCCAGC GCGACCTGGC CGAGCGCCTG
CTCGAGCAGC GCAAGCAGTG CGCCGCGGCG CGTCTTGCTG GCGACGCAGA GGAAACCGAC
GAGCCACGTG CCAGCCTGGA GGAACTGGAA GCCGAGCTGC GCGCCCTCCA GGCCGAGCTG
GCCGCGGCTC AGGCCAGCGA GCGCCTGGTC AGCTTCGAGG TCTGCCCGCG CCTGGTGGCC
GAGGTGATCA GCCACTGGAC CGGCGTGCCG CTGAGCCAGC TGGCGCGCGA GCACAACACC
AAGGTCATCA CCTTCGCCGA CGACCTGCGC CAGCGCGTGC GCGGCCAGGA GCAGGCGATC
CAGGCGCTGG ACAAGGCCAT GCGCGCCACC GCTGCCGGCC TCAACCGGCC CGATGCGCCA
GTGGGCGTGT TCCTCCTGGT CGGCCCCAGC GGCGTCGGCA AGACCGAGAC CGCCCTGGCC
CTGGCCGACC TGCTGTATGG CGGTGAACGC TTCCTCACCG TGATCAACAT GTCCGAGTTC
CAGGAAAAAC ATACCGTCTC GCGTCTGATC GGCGCGCCGC CCGGCTACGT CGGCTACGGC
GAAGGCGGCA TGCTCACCGA AGCCGTGCGG CAGAAGCCCT ACTCGGTGAT CCTCCTCGAC
GAGGTGGAGA AGGCCGACCC CGACGTGATG AACGTCTTCT ACCAGATCTT CGACAAGGGC
GTGGCCAACG ACGGCGAAGG GCGCGAGATC AACTTCCGCA ACACCCTGAT CCTGATGACC
AGCAACCTGG CCAGCGAACG CATCGCCAGC CTGTGCGCCG GTGGTGAGCG CCCGGGGGCC
GAGGACCTGG AGCTGGCCAT CCGCCCGCAA CTGACCCAGC ACTTCAAGCC GGCCCTGCTC
GGCCGTATGC GCGTGGTGCC CTACTACCCC ATGGACGGCG ACCTGCTGCG CCAGCTGGTC
GGCCTCAAGC TGGCCCGTTT CGGCGAGCGC CTGGCCCGTC GCCAGCTCGC CTTCAGCCAC
TGCGACGGCC TGGTCGAGCA CCTGGCCGAG CGCTGTACCC ATGGCGACAG CGGCGCCCGT
CTGATCGACC ACCTGATCGA CCAGCACCTG CAGCCGCTGG TGGTCGACCG CCTGCTCGAC
GCCATGGCGA GCGGCGAGAC CTTGCAGCAG GTACGCGCCA CCCTGAACGG TGAAGGAACG
GTGGTCTGTG AGTTCGCTTA A
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| Protein sequence | MINVDLQQLV QALDAASKRD LEMAAERCVV RGGNKILVED LLLGLLERPE SLLARALQDA
EIDAGELAQA LQPRGEHSES RNPVFSAELV QWLQDALLVA NLELGASQID QAALILALLR
NPMRYAGSRY QTLLSKLNAE RLRDFALSQQ PQAAGGKAAA PGESNLARFT HNFTQQARDG
KLDPVLCRDG AIRQMVDILA RRRKNNPIVV GEAGVGKTAI VEGLALRIAT GEVPQVLKGV
ELLCLDLGLL QAGASVKGEF ERRLQGVIDE VKASPKPIIL FIDEAHTLIG AGGQAGSGDA
ANLLKPALAR GELRTIAATT WSEYKKYFEK DPALARRFQP VQLHEPTVDE AVTILRGLAP
VYEKSHGIYL RDDAVVAAAE LSARYLAGRQ LPDKAVDVLD TACARVRISL AAAPEALERL
RGEIAEGERQ GEAMRRDLDA GLSIDGEALD ALETRLVAAR AELEQVETRW AIQRDLAERL
LEQRKQCAAA RLAGDAEETD EPRASLEELE AELRALQAEL AAAQASERLV SFEVCPRLVA
EVISHWTGVP LSQLAREHNT KVITFADDLR QRVRGQEQAI QALDKAMRAT AAGLNRPDAP
VGVFLLVGPS GVGKTETALA LADLLYGGER FLTVINMSEF QEKHTVSRLI GAPPGYVGYG
EGGMLTEAVR QKPYSVILLD EVEKADPDVM NVFYQIFDKG VANDGEGREI NFRNTLILMT
SNLASERIAS LCAGGERPGA EDLELAIRPQ LTQHFKPALL GRMRVVPYYP MDGDLLRQLV
GLKLARFGER LARRQLAFSH CDGLVEHLAE RCTHGDSGAR LIDHLIDQHL QPLVVDRLLD
AMASGETLQQ VRATLNGEGT VVCEFA
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