| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0092 |
|---|
| Symbol | |
|---|
| ID | 5106277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 87913 |
|---|
| End bp | 88341 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640501308 |
|---|
| Product | GPW/gp25 family protein |
|---|
| Protein accession | YP_001185598 |
|---|
| Protein GI | 146305133 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAT ACGGCAGCCT GTTCGAGCGT CTCGGTGGCG AGGCCGGCCA ACGTGCCGGC
TGGAGCCGCG AGGTCGCCGC CATGGCCTCG GTGGCTGCCC ATCTGGCCAA GATGCTCAGC
ACCCGTGCGG GCAGCGTGCA GACGCTGCCC GACTACGGGC TGCCCGATTT GAACGATATG
CGCCTGTCGC TGCACGACTC GCTGCAGCAG GCGCGTATCG CCATCGAACG CTTTATCGAA
GCGTACGAAC CCCGTCTGAC CCAGGTGCGC GTGATTTCCC TGCCGCGCAC CCATGATCCG
CTGCGCCAGG CCTTTGCCAT CGACGCGATG CTGGAGATGG ATGGCGTCAG GCGTCAGGTC
AGTTTCTCCG CGAGCCTGGA CGGCAGCGGT CAGGTCAAGG TCAACCCAGG AGCCTCACAT
GTCCGGTAA
|
|---|
| Protein sequence | MNGYGSLFER LGGEAGQRAG WSREVAAMAS VAAHLAKMLS TRAGSVQTLP DYGLPDLNDM
RLSLHDSLQQ ARIAIERFIE AYEPRLTQVR VISLPRTHDP LRQAFAIDAM LEMDGVRRQV
SFSASLDGSG QVKVNPGASH VR
|
|---|
| |