| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0069 |
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| Symbol | |
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| ID | 5106254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 66677 |
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| End bp | 67420 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640501285 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001185575 |
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| Protein GI | 146305110 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA ATCTGCTGAT CACCGGTGCC AGCCGCGGCA TCGGCCGTGC CACGGCCCTG
CTGGCCGCCG CGGGCGGCTG GACGGTCGGG GTGAACTATC GCAGCGACCG CGCCGCCGCC
GATGAGGTGG TGGCGCAGAT CGAAGCCATG GGCGGCACAG CCGTCGCCCT GCCTGGCGAC
GTGGCCAATG AGCAAGAGGT GCAGCGCCTG TTCGAGGCCA TGGACAGGCT CGGCCCGCTG
CACGGTCTGG TGGTCAATGC CGGCATCGTC GCACCGCCCC TGCCGCTGCT GGAGATGAGC
GGCGAGCGCC TGCGGCGCAT GTTCGACGTC AACGTGCTGG GCAGCTACCT GACCGCGCGC
GAAGGCGCCC GGCGCATGGC GCGCAGTCGC GGCGGCGAAG GTGGCTCGAT GGTGCTGGTG
TCTTCGGTGG CCGCCAGCCT GGGCGCGCCG TTCGAATATG TCGACTACGC CGGCGCCAAG
GGTGCCATGG ACGTGCTGAC CCGCGGCCTG GCCAAGGAGC TGGGCGGTGA GGGTGTACGG
GTCAATGCCG TGCGGCCGGG GCTGATCGAC ACCGAGATCC ACGCCAGCGG CGGCCAGCCG
GATCGCGCCG AGCGCCTCGG CAAGGCCACC CCGCTGGGCC GCGCCGGCCG CGCGGAGGAG
GTTGCCGAGG CCATCGTCTG GCTGCTCGAT GACAAGGCCA GCTACACCAC CGGTGCGCTG
ATCGATATTG CCGGCGGGCG TTGA
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| Protein sequence | MRKNLLITGA SRGIGRATAL LAAAGGWTVG VNYRSDRAAA DEVVAQIEAM GGTAVALPGD
VANEQEVQRL FEAMDRLGPL HGLVVNAGIV APPLPLLEMS GERLRRMFDV NVLGSYLTAR
EGARRMARSR GGEGGSMVLV SSVAASLGAP FEYVDYAGAK GAMDVLTRGL AKELGGEGVR
VNAVRPGLID TEIHASGGQP DRAERLGKAT PLGRAGRAEE VAEAIVWLLD DKASYTTGAL
IDIAGGR
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