Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0036 |
Symbol | |
ID | 5106934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 33458 |
End bp | 35032 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501252 |
Product | transposase IS66 |
Protein accession | YP_001185542 |
Protein GI | 146305077 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCG TGCCCGCCCC CCTTCCTGAC GACCCAATCC TGCTCAAGCA TTTACTGCTG CTGGCCAGTG AACAGGCGGC TGCGAAAGAT GCTCGCATAG AACAACTTCA GGAACAGGTC GCCCTGCTGC GCCACAAGTT GTTCTCGCCC AAGTCCGAGC GCAGCCCTGA AGACGCCGAC TCACCGCAGT TGGCCATGTT CAACGAGGTC GAAGAGCTGA TCGAAGCGGC CGCTGCGCCA AGCGAAGCCG AAGCCGAAGC CGAAGCCGAA GCCGAAGCCG AAGCCGAAGA AATCGTTGCG CCGGTCAAGC GCCGTGGCAA GCGCAAGCCG TTGCCGGCCA ACCTGCCGCG TGTCGAAGTC ATCCACGACC TGCCCGAGCA CGAGCTGACT TGCGCCTGTG GCGCCTGCAA ACAAGTCATC GGCGAGGAGA CCAGCGAACA GCTGGAGATT ATCCCGATGC AGGTGCGGGT CATCCGCCAT ATCCGCAAGA CCTACGCCTG CAAGGCCTGC GAAGCGGCGC CGCTCACTGC CGACAAGCCG GCCCAACTGA TCGAGAAGAG CCTGGCCAGC CCCAGCGTGT TGGCCATGCT GCTGACCACC AAGTACGCCG ACGGCATCCC GCTGTACCGC TTCGAGAAGA TGCTCAGCCG CCACGGCGTC GACATACCAC GCCAGACCCT GGCGCGCTGG GTGATCCAGA GCGGTGAACA GCTGCAACCG CTGCTCAACC TGCTGCGCGA CAAGCTGCTC GAATACCCCG TTTTGCACTG CGACGAAACG CGCCTGCAGG TGCTGCATGA ACCGGGACGC GATCCCACCG CGCAGTCCTG GATGTGGGTA CAAAGCGGTG GACCACCGGA TAAGCCGGTG ATCCTCTTCG ACTACACCGC CAGCCGCGCG CAGGAGGTGC CGCTGCGCTT GCTCGACGGC TATCGCGGCT ACCTGATGAC CGACGACTAC GCCGGCTACA ACGCCGTGGC CGCGCAAGAA GGCATCGAAC GCCTCGGCTG CTGGGCGCAT GCGCGGCGCA AGTTCGTCGA GGCGCAGAAA GTGCAACCCA AGGGCAAAAC CGGCCGTGCC GACATGGCGC TGAACCTGAT CAACAAGCTC TACGGCATCG AGCGTGACCT GAAGGACGCC TGCGATACCG AGCGCCTGGT CGCCCGTCAG CAACGCAGCC AGCCGCTGCT CGATCAACTC AAGACCTGGC TGGACAAGAC CCAGCCGCAG GTCGTCGGGC AGACGGCGCT GGGCAGGGCG GTGAACTACC TGGCCAGCAA CTGGAGAAAG CTGGTGCGCT ACGTCGAAGG TGGACATCTG CCGATCGACA ACAACCGCGC GGAGAACGCC ATCCGCCCGT TCGTTATCGG GCGCAAGAAC TGGCTGTTCA GCGACACGCC CAAGGGGGCC ACGGCCAGCG CACAGATCTA CAGCCTGATC GAAACCGCCA AGGCCAATGG CCAGGAGCCT TACGCCTGGC TGCGCCACAT CCTCGAACGC CTGCCGGCCG CCAATAGCGT CGAGGATTAC GAAGCGCTGC TGCCGTGGAA TTGCTCGCCA GTGAGCGCAT CCTGA
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Protein sequence | MIAVPAPLPD DPILLKHLLL LASEQAAAKD ARIEQLQEQV ALLRHKLFSP KSERSPEDAD SPQLAMFNEV EELIEAAAAP SEAEAEAEAE AEAEAEEIVA PVKRRGKRKP LPANLPRVEV IHDLPEHELT CACGACKQVI GEETSEQLEI IPMQVRVIRH IRKTYACKAC EAAPLTADKP AQLIEKSLAS PSVLAMLLTT KYADGIPLYR FEKMLSRHGV DIPRQTLARW VIQSGEQLQP LLNLLRDKLL EYPVLHCDET RLQVLHEPGR DPTAQSWMWV QSGGPPDKPV ILFDYTASRA QEVPLRLLDG YRGYLMTDDY AGYNAVAAQE GIERLGCWAH ARRKFVEAQK VQPKGKTGRA DMALNLINKL YGIERDLKDA CDTERLVARQ QRSQPLLDQL KTWLDKTQPQ VVGQTALGRA VNYLASNWRK LVRYVEGGHL PIDNNRAENA IRPFVIGRKN WLFSDTPKGA TASAQIYSLI ETAKANGQEP YAWLRHILER LPAANSVEDY EALLPWNCSP VSAS
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