Gene Pmen_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0027 
Symbol 
ID5106702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp26994 
End bp27527 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID640501244 
Producthypothetical protein 
Protein accessionYP_001185534 
Protein GI146305069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG CTGCCGAGCG CTGGGTGCGC TGGTGGTGCG AGGCCTGGCA CTTCGCGCAT 
CCGGGCTGGC GGCGATCATC TCCGGTGCTG GCAGCCGCGG CAGATTGCTC CCATAGCCGT
CATGCCGCGC TCGCCCAGTC TCTGGGAATC GGCGCTACGC AACCCCCGCC ACCGCATGAG
GGTGTCCTGC AATGGCTGGC ATTGAACGAG CGCCAGCGCC AGCACGCGCT AGCCCTGGCG
CAGCACATCT GTTCGGCGAA AGCCCCCTGC CAGGCCCTGC CTGCCGATGC CGACTGGTGT
CGCAGCTTGG GCAAGGCATT GCGTCCCGGC TTGTGGCTGA CCGCCGAAGC CACAGATCCC
AGGCTGTTGC TCGGCGCCTG GGCCGGACCT GCATGCTGGG AACGCCTGCG CCTGCAGTGG
GCGCCCGGTT CGCTGGAAGA ACTCCCCCCG GATCTGCCAG CCAGACGCCT GGCCACCCTG
TGGGCGGCGG TGCTGTGGCG AACCTCGCAG ATGGAGCGCA CTCGTGCTGA CTAA
 
Protein sequence
MSDAAERWVR WWCEAWHFAH PGWRRSSPVL AAAADCSHSR HAALAQSLGI GATQPPPPHE 
GVLQWLALNE RQRQHALALA QHICSAKAPC QALPADADWC RSLGKALRPG LWLTAEATDP
RLLLGAWAGP ACWERLRLQW APGSLEELPP DLPARRLATL WAAVLWRTSQ MERTRAD