| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0014 |
|---|
| Symbol | glyQ |
|---|
| ID | 5106689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 15862 |
|---|
| End bp | 16809 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640501231 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_001185521 |
|---|
| Protein GI | 146305056 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGA ACAAGCCTGC CGTGCGCACC TTCCAGGACC TGATCCTGGC CCTGCAGAAC
TACTGGGCCG AGCAGGGCTG CGTGGTGCTG CAACCCTACG ACATGGAAGT GGGCGCCGGC
ACCTTCCACA CCGCCACCTT CCTGCGCGCC GTCGGCCCCG AGACCTGGAA CGCCGCCTAC
GTGCAGCCGT CCCGTCGCCC GACCGACGGC CGCTACGGCG AAAACCCCAA CCGCCTGCAG
CACTATTACC AGTTCCAGGT GGTCTTGAAG CCCAACCCGG AGAACTTCCA GGAGCTGTAC
CTGGGTTCGC TCAAGGCCAT CGGCCTCGAC CCGGAAGTGC ACGACATCCG CTTCGTCGAG
GACAACTGGG AATCGCCCAC ACTCGGCGCC TGGGGCCTGG GCTGGGAAAT CTGGCTCAAC
GGCATGGAAG TCACCCAGTT CACCTACTTC CAGCAGGTCG GCGGCATCGA GTGCTACCCG
GTGACCGGCG AGATCACCTA TGGCCTGGAG CGCCTGGCCA TGTACCTGCA GGGCGTCGAC
TCGGTCTACG ACCTGATCTG GACCGACGGC CCGTTCGGCA CCGTGACTTA CGGCGACGTG
TTCCACCAGA ACGAGGTGGA GCAGTCCACC TACAACTTCG AGCACGCCAA CGTCGAGAAG
CTGTTCGAGC TGTTCGACTT CTACGAGAGC GAAGCCAACC GCCTGATCGA GCTGGAGCTG
CCGCTGCCGA CCTACGAGAT GGTGCTCAAG GCCTCGCACA CCTTCAATCT GCTCGACGCC
CGTCGCGCCA TTTCGGTGAC CGCGCGCCAG CAGTACATCC TGCGCGTGCG CACCCTGGCC
CGTGCGGTAG CGCAGAGCTA CCTGCAGGCG CGCGCCAAGC TCGGCTTCCC CATGGCCACC
CCCGAACTGC GTGACGAAGT ACTGGCCAAG CTGGAGGCGC AAGCATGA
|
|---|
| Protein sequence | MSQNKPAVRT FQDLILALQN YWAEQGCVVL QPYDMEVGAG TFHTATFLRA VGPETWNAAY
VQPSRRPTDG RYGENPNRLQ HYYQFQVVLK PNPENFQELY LGSLKAIGLD PEVHDIRFVE
DNWESPTLGA WGLGWEIWLN GMEVTQFTYF QQVGGIECYP VTGEITYGLE RLAMYLQGVD
SVYDLIWTDG PFGTVTYGDV FHQNEVEQST YNFEHANVEK LFELFDFYES EANRLIELEL
PLPTYEMVLK ASHTFNLLDA RRAISVTARQ QYILRVRTLA RAVAQSYLQA RAKLGFPMAT
PELRDEVLAK LEAQA
|
|---|
| |