| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_2072 |
|---|
| Symbol | |
|---|
| ID | 3744201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 2302278 |
|---|
| End bp | 2303981 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770103 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_375957 |
|---|
| Protein GI | 78187914 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCCT TTTCACGTCC TGCGGTCCTG CATCTCCTGT TTGCCCTGAT TATTGCCGCA
TGCCTGCCGA AGCAGCTCTC TGCCGCCACC GCCCCTCCGT GGACCGTTTC TTCGGTTCCA
CTCCGCATCA TGCAGGGCAA TGGTGAGGGA TACACCATAA AGGTGCTTAC CCGCAAAGGT
GCAGACGGCA GGATCCTTGT CGACCTTCAG TCCATGACGC GGGCCATGCG GCTCACCTAC
CGGACTTCGG CCGGGATGCT CTCGGCCGAA GAGGCCATCT CTTCACACGG CAGTGTCTGC
ACCCTCACGG CCGGCAACAG TTTTGCCCGC ATCGTTTACC GCCGCGCTGC CGATCCGGCA
AGGATTGTGC AGCTTTCCGC TGCTCCGCAG CTGCTGGACC AGCGCCTCTT TCTTCCCATA
AGCCAGTCCG CCAGGATTTT TTCCATCTGG CTTGACCGCG ATGTCATCTA CAGCGCTTCC
GAAAAGATGT TCAAGGTCTG GCTGCAGCCC CGTCCTCTCG GACGATCGGA AGCTTCCATC
GGTACACTCT CCCCCACGCC CCCTCCTCCA CCTCCGGCTT TTGGCCCGAC GAGGATAACC
GGCGTTGATG TTGAAGAACG GGCCAACGGT GCGATCATCT CGTTTTCCGC CTCCGGAGCA
CAGGCTTCGG CTGCGCTTTC GCAGCCCGAT GCTTCAGGCA GGGCATCATT CGTTCTTTCC
GGTGCCTCCG GCGATCCGGC CATCCTTAAA AAGATGTTCC CCTCGGGCCT TGTGCGTTCC
GTCACGGCCG ATCGCACTCC TGCCGGCGCA CTGCGTTTCA GTGTGAGCTT CGACGGCCGC
TCCGGTGTCG TGCGCTCGCT TGATTACCAG CGCGACCAGC GCAACAACCG CTACCTCCTC
TATGTTCGCA GTGATGCAGA CGTGGAGGCC ATCCGCAGCA GGGAAAAATT ACAGCGGATC
GCAAGTGTGA TCAGCCGCGA TGTTGAAAAA TGGAAACTCA ATACCATCGT ACTGGATGCC
GGCCACGGTG GGCAGGATCC CGGGGCGGTA GGCTTGAAAG GGACCCGTGA AAAGGATGTC
GCACTCAACA TCGTCAGGGA CCTCGGCAGC ATCATTGCAC GGAAGTGGCC CGATGTGGAG
GTCGTTTATA CCCGTAAAGA CGACATCTTC ATCCCGCTCC ACGAGCGGGG GCGGATCGCC
AACCGCACTG AGGGCAAGCT GTTCCTCAGC GTTCACTGCA ATGCCAATGA AAACCGTTCG
ATACGGGGGC CGGAGGTATA CATTCTCGGC CCGCACAAGA CGGCCGCCGC ACTGAAGGTC
GCCATGCTTG AAAACGGTGT CATAAGTCAG GAATCGGACT ACCGCGAGCA GTACCGGAAC
TTCAGTGACG AGCATCTCAT CATGAGCTCC ATGGCCCAGA ACTCCTTCAT CCGCCACTCC
ACAACTCTCG CCCGGGAGCT CGTAAAGCCG CTCGACCGTT CGACGAGCAC GAATGGCCGG
GCAGTCCGCC AGGCAGGGTT CATGGTGCTT TGGACTCCTT CCATGCCGAG CGCCCTTGTA
GAGGTCGGCT ACATCTCCAA TCCCCGTGAA GAGGTTATTC TTCGTGACCG CCAGGAGCAG
ACCAAGATTG CCTACGGGAT TTTCCAGGGC CTCCAGGCCT ACCGGACCCA ATACGAGGCA
TCACGCATGG CCTCCGCCCG TTAG
|
|---|
| Protein sequence | MMPFSRPAVL HLLFALIIAA CLPKQLSAAT APPWTVSSVP LRIMQGNGEG YTIKVLTRKG
ADGRILVDLQ SMTRAMRLTY RTSAGMLSAE EAISSHGSVC TLTAGNSFAR IVYRRAADPA
RIVQLSAAPQ LLDQRLFLPI SQSARIFSIW LDRDVIYSAS EKMFKVWLQP RPLGRSEASI
GTLSPTPPPP PPAFGPTRIT GVDVEERANG AIISFSASGA QASAALSQPD ASGRASFVLS
GASGDPAILK KMFPSGLVRS VTADRTPAGA LRFSVSFDGR SGVVRSLDYQ RDQRNNRYLL
YVRSDADVEA IRSREKLQRI ASVISRDVEK WKLNTIVLDA GHGGQDPGAV GLKGTREKDV
ALNIVRDLGS IIARKWPDVE VVYTRKDDIF IPLHERGRIA NRTEGKLFLS VHCNANENRS
IRGPEVYILG PHKTAAALKV AMLENGVISQ ESDYREQYRN FSDEHLIMSS MAQNSFIRHS
TTLARELVKP LDRSTSTNGR AVRQAGFMVL WTPSMPSALV EVGYISNPRE EVILRDRQEQ
TKIAYGIFQG LQAYRTQYEA SRMASAR
|
|---|
| |