| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1780 |
|---|
| Symbol | nusA |
|---|
| ID | 3745432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 1988579 |
|---|
| End bp | 1990240 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637769816 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_375677 |
|---|
| Protein GI | 78187634 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0199707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0564295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAA AGCAGGTAAA AGCTGAAGGA GCTGACAGGA AGGCACAGAT CGCTAGCGCG
TTCGGTGAAA TCGAGCAGTC GAAGATTTTC CTCGACAAGC GCGTTGAGAG CGCTGCGGTG
AAAATGGACA TTGCCGACCT TCTGAAGGAT ATCATCCAGA AGCAGCTCCG CAAGGACTAC
GACCCGGAGG TCGAGGCCAA CATCTTCATC AACCCTGAGA GAGGCGACTT CGAGGTCTAT
ATCCTGAAGA AGATCGTCGA AGAGGTGGAC ATCGCACCGA TCGAAATCAG CCTCGAGGAG
ATCCGCAGGA TCGACGAATC GCTTGAAGTC GGTGATTACT ATGAAGAGGG TCCCATCAAG
CTTGACGACT ACCTCACGCG CAAGTCCATC CAGATCATCA AGCAGTCGGT GCAGAAAAAG
GTGCGCGACC TTGAGCGTAT GGTTGTGTAT GAAGAGTGCC TCGAGAAGGT CGGCGAGGTG
ATCGCTGCCG AGGTATACCA GGTTCGTTCG AATGAGGTGA TCTTCACCTA CAACACATCG
AAAGACCACC GGGTCGAACT GGTGCTGCCG AAGTCTGAGA TGATGAAGAA GGACAACCCC
CGCCGTACCC CCCGCATGAA GCTCTATGTG AAGAACATCG AGCGCGAGCG GGTGAAGGTA
CGCCTCGATG ACGGTACGAT GGAAGAGAAG GAGAAGGCGG ACGGCGGCAT GAAGGTCATC
GTATCGCGTG TCGACGACCG CTTTCTCTAC AAACTCTTCG AACAGGAAGT CCCCGAAATC
CTTGACGGCC TCATCGTCAT CAAGGGCATC GCCCGCGTGC CGGGCGAGCG GGCGAAAGTC
GCCGTCGAAT CGACGAGCGC ACGCATCGAC CCTGTCGGCG CCACGGTCGG TTACCGGGGA
AAACGCATCC AGAGCATCGT CAAGGAACTC AACAACGAGA ACATCGACGT CATCTACTAC
AGCGACGAAC CGCAGGTCTA TATTTCACGT GCACTGCAGC CGGCAAAGAT CGACCCGCTT
ACGGTACATG CCGACATGAA GACCCGCAAG GCCCGTGTGA TGCTGAAGCC CGACCAGATC
AAATACGCGA TCGGCAAGAA CGGCAACAAC ATCCATCTGG CCGAGAAACT GACCGGATAT
GAGATCGATG TCTACCGCGA CGTGATTGAC CGTTCGATGG AGGATCCTAC CGACATCGAC
ATCATCGAGT TCCGCGAGGA GTTTGGCGAC GACATGATCT ACCAGCTGCT CGATGCCGGC
CTCGATACCG CCAAGAAAGC GCTGAAAGCC GGCGTGGAGG AGATCGAGCA GGCACTGCTC
GGCCCGCAGC GACAGGAAGA AGTCACCGTG TTCGGCAAGA GCATGCGCGG TCCCGCCAAA
CCGAGGGAAC GCCGTATCAG CGATGACGAA AAGCGCTACT GGCACAAGAT TGCCGATACG
ATCTACCGCA CCGTGAAGGA GCAGTTCTCG GACGAGGATC TGGAGGATCT GTTCAAGGAG
CCCGAACCGT TGTTTTTCGA TGCGTCCGAC AGAGGTGGAG AAGATGCGGC CCCTGAGGTT
CCTGCTGACC CTGAAGCCAG CGGGATAGCG GATGCAGCCG TGGATGAGGA TGAGGCTCAG
GCCCCCCTGT CCGCCGGCGA AACGGCCCCC GACGAGGAGT GA
|
|---|
| Protein sequence | MARKQVKAEG ADRKAQIASA FGEIEQSKIF LDKRVESAAV KMDIADLLKD IIQKQLRKDY
DPEVEANIFI NPERGDFEVY ILKKIVEEVD IAPIEISLEE IRRIDESLEV GDYYEEGPIK
LDDYLTRKSI QIIKQSVQKK VRDLERMVVY EECLEKVGEV IAAEVYQVRS NEVIFTYNTS
KDHRVELVLP KSEMMKKDNP RRTPRMKLYV KNIERERVKV RLDDGTMEEK EKADGGMKVI
VSRVDDRFLY KLFEQEVPEI LDGLIVIKGI ARVPGERAKV AVESTSARID PVGATVGYRG
KRIQSIVKEL NNENIDVIYY SDEPQVYISR ALQPAKIDPL TVHADMKTRK ARVMLKPDQI
KYAIGKNGNN IHLAEKLTGY EIDVYRDVID RSMEDPTDID IIEFREEFGD DMIYQLLDAG
LDTAKKALKA GVEEIEQALL GPQRQEEVTV FGKSMRGPAK PRERRISDDE KRYWHKIADT
IYRTVKEQFS DEDLEDLFKE PEPLFFDASD RGGEDAAPEV PADPEASGIA DAAVDEDEAQ
APLSAGETAP DEE
|
|---|
| |