Gene Plut_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1732 
SymbolrpsA 
ID3745200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1939607 
End bp1941376 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content57% 
IMG OID637769766 
Product30S ribosomal protein S1 
Protein accessionYP_375629 
Protein GI78187586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000125222 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00441133 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAGAAA CAGTAGCAGT CGAAAAAACG GTCAAGGAAA AACCCGCGAG AAAGAAAATC 
AAGTATTTTG CTCACTACGA GCCCGCAGAG CTTTCCCAGA TGGAGCAGCT GTACACCAGC
ACGCTCAATG AAATCACCGA AGACGAGATC GTAAAGGGAC GCATCGTCTC GATCTCCAAC
AAGGACGTCA CCATCGACGT CGGATTCAAG TCGGAAGGCA TCGTCTCCCT GCTCGAGTTC
CGCGATGACG ACGAGATCAA GGTCGGCGAT GATGTCGAGG TCTACCTCGA GAACATCGAG
GACAAGATGG GCCAGCTCAT CCTCTCCAAG AAGAAAGCCG ACGTCCTTCG TATCTGGGAC
AAGATCTATG ATTCAATCGA GAACGACACG ATCATCAACG GCAAGATCAT CAACCGCGTC
AAAGGCGGCA TGACGGTTTC GCTTTCCGGC GTGGAGGCCT TCCTTCCCGG CTCGCAGATC
GATGTCAAGC CTGTCCGCGA TTTCGACGCT CTTGTCGGCC AGACCATGGA CTTCAGGGTC
GTCAAGATCA ACCCCGTCAC CCAGAATATC GTCGTCAGCC ACAAGGTCAT CCTTGAGGAG
GAGTACGCTG CACGCCGCGA GGAAATGCTT GCCAACATCA AGGTCGGCAT GGTGCTCGAG
GGCACGGTCA AGAACATCAC CGATTTCGGT ATCTTCGTCG ACCTCGGCGG TCTCGACGGT
CTCGTCCATA TCACCGACAT CACCTGGGGC CGCATCAACC ATCCGTCCGA GGTTGTTGAG
CTCGATCAGC CGATCAAGGT CGTTGTCGTC GGTTTCGACG AGAACACCAA GCGTGTCTCC
CTCGGCATGA AGCAGCTTGA GGCGCATCCC TGGGAAAACA TCGAACTCAA ATACCCTGTG
GGCTCCAAAG CTCAGGGCCG CGTTGTCTCC ATCACCGATT ACGGCGCTTT CGTCGAGATC
GAGAAGGGCA TCGAAGGCCT CGTCCATATC TCCGAAATGA GCTGGACGCA GCATATCAAG
CATCCGGGTC AGTTCGTCAC CCTCGGTCAG GAAGTCGAGT GCGTGATTCT GAACATCGAC
AAGGATCACA CCAAGCTCTC GCTCTCCATG AAGCGGGTCA ACGAGGACCC CTGGATCGCT
CTCAGCGAGA AGTACACTGA AGGGTCGCTT CACAATGGCA CCGTCAGCAA CATCACCGAC
TTCGGCGTCT TCGTCGAGCT CGAGGCAGGT GTCGACGGTC TGGTGCACAT TTCCGACCTG
TCATGGACAA AGAAGATCCG CCACCCGAGC GAACTGGTGA AGAAGAACCA GGAGCTCAAT
GTCAAGGTGC TGAAGTTCGA CGTGCACGCA CGCCGCATCG CCCTCGGCCA CAAGCAGATC
AACCCCGATC CGTGGGGCGG CTTCGAGCAG CAGTACGCTG TCGGCGCTGA AACCCCGGGC
CAGGTCTCCC AGATCATCGA GAAGGGCGTC ATTGTGATCC TTCCCGGCGA TGTCGATGGC
TTCGTTCCGG TGACCCATCT GCTCCAGGGC GGCGTGAAGG ATATCCACAC CTCCTTCAAG
GCAGGCGATG AGCTTCCGCT CCGCGTCATT GAGTTCGACA AGGAGAACAA GCGCATCATC
CTCTCCGCGC TTGAGTACTT CAAGGACAAG AGCAAGGAGG AGATCGAGTC GTACCTCCAG
GCTCATCCGA ACGAGAAGAA GGAGATCGAG GACGCCACCG CCGAGCTGGA ACCCCAGCCG
AAGGCGGACA GGAAAGGCGA CAGGCAGTAA
 
Protein sequence
MLETVAVEKT VKEKPARKKI KYFAHYEPAE LSQMEQLYTS TLNEITEDEI VKGRIVSISN 
KDVTIDVGFK SEGIVSLLEF RDDDEIKVGD DVEVYLENIE DKMGQLILSK KKADVLRIWD
KIYDSIENDT IINGKIINRV KGGMTVSLSG VEAFLPGSQI DVKPVRDFDA LVGQTMDFRV
VKINPVTQNI VVSHKVILEE EYAARREEML ANIKVGMVLE GTVKNITDFG IFVDLGGLDG
LVHITDITWG RINHPSEVVE LDQPIKVVVV GFDENTKRVS LGMKQLEAHP WENIELKYPV
GSKAQGRVVS ITDYGAFVEI EKGIEGLVHI SEMSWTQHIK HPGQFVTLGQ EVECVILNID
KDHTKLSLSM KRVNEDPWIA LSEKYTEGSL HNGTVSNITD FGVFVELEAG VDGLVHISDL
SWTKKIRHPS ELVKKNQELN VKVLKFDVHA RRIALGHKQI NPDPWGGFEQ QYAVGAETPG
QVSQIIEKGV IVILPGDVDG FVPVTHLLQG GVKDIHTSFK AGDELPLRVI EFDKENKRII
LSALEYFKDK SKEEIESYLQ AHPNEKKEIE DATAELEPQP KADRKGDRQ