Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1635 |
Symbol | |
ID | 3746141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 1832329 |
End bp | 1834527 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637769668 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_375532 |
Protein GI | 78187489 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000929838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.469097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCA CGAAAGAAAT CAATCTCGGA CAGGGCAAAA CGATCTCGAT CGAAACCGGC AGGATGGCCA AACAGGCCGA CGGTGCCACC GTGGTCCGCA TGGGCGACAC CATGGTCATC GCCACCGTCG TATCCAGCCG CAAAACACCT TCTGTCAATC AGGACTTCTT TCCGCTCCAG GTTGAATACC GCGAGAAATA CTATGCCGCA GGCAAGTTCC CCGGCGGATT CTTCAAGCGT GAAGCCCGTC CCTCGGAAAA AGAGATCCTT TCGGCACGCC TTATCGACCG CGCACTCCGC CCGCTCTTCC CGACCGGCTA CTACCACGAG ACCCAGGTCA TCATCAACGT CATCTCCAGC GACCAGCAGA ACGATGCCGA CGTGCTCGGC GGACTGGCCG CATCGGCAGC CATCATGGTC TCCGACATCC CCTTCGAAAA CGCCATGTCA GAGGTCCGCG TCGGCAGGGT GAACGGCCTG TTCATCATCA ACCCGACCAT CGACGAGCTT GAGGGCAGCG ATATCGACAT CAGCATCGGC GGCACCGCCG ACACCATCTG CATGCTCGAG GGCGAGATGA AGGAGATTTC CGAAGCCGAG ATGCTCGACG CCATCAAATT CGGCCATGAA GCCATCAAGA AGCTCTGCCA GCTCCAGAAT GAACTCGCAG GTGAGGTAGC CAAAGCCAAA CGCCCCTTCA CCCCGCTCCA GGTTCCTGCA GAACTCTCGG AGTATGTGAA GAACGCCTGC GAAAGCAGCC TGAAAGAGCT GGCCTACAAG CCGCTTGCAA AGGAAGTGCG CGCAGATGAG ACGAAGGCGA TCTACAGCGA GACCGTCAAA AAGGCCATCG AGCATTTCAG TGCCGCCTTC GGTCCTGAAG CACTCGCTGC CGACCCGTCC AAAGCGCTCT GCCTGAACGA GCACATCATT GAAGAAGAGA TCCACTCCTT TGAAAAGAAC GTCATGCGCC GCATGATCCT CGACGACGGC AAACGACTTG ACGGCAGGAA CCTTGAGCAG GTCCGGCCCA TCACGATTGA ACTCGGCGTC ATCCCGAGAG CCCACGGCTC CGCTCTTTTC ACCAGAGGCG AAACCCAGGC GCTTGTCGCC GTCACCCTCG GAACCAAGAA AGACGCGCAG TCTGTCGACA CCCTCACCAA CAGCGCCGAC AAGCGCTTCA TGCTCCACTA CAACTTCCCG CCTTTCTCAG TCGGTGAAGT CGGCAGACTC GGTTCCACCG GACGCCGCGA AATCGGACAC GGCAACCTTG CCGAGCGCTC CATCAAGATG GTCGCCCCCG GCGAGCAGGA GTTCCCATAC ACTGTCCGCA TCGTCTCCGA AATCCTTGAG TCGAATGGTT CATCCAGCAT GGCTTCGGTC TGCGGCGGCA CCCTCGCACT GATGGACGGT GGCGTTCCGC TGAAGAAGCC GGTCTCCGGC ATCGCAATGG GCCTCATCAA AGACGGCGAA GAGTACGCAG TCCTCTCCGA CATCCTCGGC AACGAGGACC ATCTCGGCGA CATGGACTTC AAGGTAGCCG GCACCCGGGA CGGCATCACC GCATGCCAGA TGGACATCAA GATCGACGGA CTCGACTACC ACATCCTCGA GAACGCGCTG GCACAGGCCC GTCGCGGCCG CTTCCACATC CTTGACAAGA TGGAGGAAGC CATTCCTGCA TCGCGTGAGG AACTGGCCCA GTACGCTCCC CGACTCACCG CCATCCAGGT TCCTGTTGAG TCCATCGGGC TCATCATCGG CAAGGGCGGC GAAACCATAC GCAGCATCAC CGAAGAGACC GGTGCGGAGA TCAACATCGA GGATGACGGC ACTGTCACCA TCGCATGCTC CAGCAACGAA GGCACCAAGG CTGCCGTCGA AATCATCAAG GCGCTCATCG CCAAACCTGA AGTCGGCACC ATCTATGTCG GCAAGGTTCG CGACGTTCGC GACGAGCTTG GCGCATTCGT CGAGTTCATC CCGAAGACCG ACGGCCTCGT CCACATCTCA GAGATCTCCA GGGAGCGGGT CACCAAAGTC AGCGACCACC TGAAGGTCGG TGACCGCATC AAGGTCAAGC TTGTCGATAT CCGCAAGGAT CCGAGGACCG GCAAAACCCG CTTCGCCCTC TCAATGAAGG CGGTGGATGA AGAGCCGGTC AACGGCACAG AGGCCGGCGC CGCCCCTGAA AACAACTGA
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Protein sequence | MIITKEINLG QGKTISIETG RMAKQADGAT VVRMGDTMVI ATVVSSRKTP SVNQDFFPLQ VEYREKYYAA GKFPGGFFKR EARPSEKEIL SARLIDRALR PLFPTGYYHE TQVIINVISS DQQNDADVLG GLAASAAIMV SDIPFENAMS EVRVGRVNGL FIINPTIDEL EGSDIDISIG GTADTICMLE GEMKEISEAE MLDAIKFGHE AIKKLCQLQN ELAGEVAKAK RPFTPLQVPA ELSEYVKNAC ESSLKELAYK PLAKEVRADE TKAIYSETVK KAIEHFSAAF GPEALAADPS KALCLNEHII EEEIHSFEKN VMRRMILDDG KRLDGRNLEQ VRPITIELGV IPRAHGSALF TRGETQALVA VTLGTKKDAQ SVDTLTNSAD KRFMLHYNFP PFSVGEVGRL GSTGRREIGH GNLAERSIKM VAPGEQEFPY TVRIVSEILE SNGSSSMASV CGGTLALMDG GVPLKKPVSG IAMGLIKDGE EYAVLSDILG NEDHLGDMDF KVAGTRDGIT ACQMDIKIDG LDYHILENAL AQARRGRFHI LDKMEEAIPA SREELAQYAP RLTAIQVPVE SIGLIIGKGG ETIRSITEET GAEINIEDDG TVTIACSSNE GTKAAVEIIK ALIAKPEVGT IYVGKVRDVR DELGAFVEFI PKTDGLVHIS EISRERVTKV SDHLKVGDRI KVKLVDIRKD PRTGKTRFAL SMKAVDEEPV NGTEAGAAPE NN
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