Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1357 |
Symbol | lysS |
ID | 3744733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 1533644 |
End bp | 1535149 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637769395 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_375259 |
Protein GI | 78187216 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGG ACAACGAACA GCTTTCCCTG AATGACCAGA TGCAGCGCCG TTTCGACGAG CGGCGCCACC TTCAGGAATC AGGCATCAAC CCCTATCCCT GCAGCTTTGA GGTAACCGGC CATTCCAGGC AGATCATCGA GCACTTCAAG GAAGACGCTG AGGAAAAAGT ATCGGTTGCC GGTCGCATCA TGGCCATCCG CAGGATGGGC AAAGCCTCCT TCTTCCATAT TCAGGACAGC GATGGCCGCA TGCAGATCTA CCTGAAAAAG GACGAAGTCG GAGACGATGC CTACGCCACA TTCAAGCTGC TCGACATAGG TGACATCGTC GGAGTCAACG GCTACACGTT CCGTACCAGA ACCGGTGAAA TTTCGGTGCA TGCCGAGTCC TTCGAACTGC TCTGCAAATC GCTGCGTCCC ATTCCCGTCG CCAAGGAAAA AGAGGTGGAG GGAGAAAAAG TGGTATTCGA CGCATTCGCC GACCGCGAAC TGCGCTACCG CCAGCGCTAC GTTGACCTCA TCGTCAACCC CGAAGTCCGC AGCACCTTCA TCAAGAGAAG CGCCATCGTA TCACACATCC GCAGCTTCTT CACGTCCCAA GGGTGGCTCG AGGTTGAAAC CCCCATCCTC CAGCCCATTT ACGGAGGAGC GGCGGCACGC CCGTTCACTA CCCACCACAA TGCGCTTGAC ATGCAGCTCT ATCTGCGCAT TGCCAACGAG CTCTACCTCA AACGCCTCAT TGTCGGCGGC TTCGACGGCG TATTCGAGTT TGCAAAGGAC TTCCGCAACG AAGGCATCGA CCGCTTCCAC AACCCGGAAT TCACCCAGGT CGAACTCTAT GTCGCCTACA AAGATTACGA CTGGATGATG CGGCTCGTCG AGGAACTCTT CCAACAGACC GCCATTGCCG TAAACGGAAC GGCAATGACA ACGTTCCTCG GCCATGAGAT AAGCCTTGAA GCACCCTTCC GCCGCCTCAC CATCGCTGAT TCCATTCGGG AGTACACCGG TGCCGAGATT GAAGGTAAAA CCGAAACGGA ACTCCGCAAC CTGGCCAAGG ACCTCGGACT GGAACTCGAT CCGAAAATAG GATCCGGAAA AATCATCGAT GAAATCTTCG GCGAATTCGT AGAGCCGAAG CTCATCCAGC CGACCTTCAT TACCGACTAC CCGACCGAGA TGTCTCCCCT TGCCAAGCCC CACCGCTCCA AACCGGGACT TGTCGAGCGC TTCGAACTTA TCGCCGGCGG CAAGGAGATA TGCAACTCCT TCTCGGAACT CAACGATCCC GTGATCCAGC GCCAGCGGCT TGAAGAGCAG GCGAGCCTCC GCCAGCGCGG TGACGATGAA GCCATGGTGG TCGACGAAGA CTTCCTCCGT GCCCTTGAAT ACGGCATGCC TCCCACGGCA GGCCTCGGCA TCGGCATCGA CCGCCTCGTC ATGCTCATCA CCGGAGAGGA ATCAATACGC GATGTCATTT TCTTCCCGCA CCTTAAGCCG GAATAA
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Protein sequence | MHQDNEQLSL NDQMQRRFDE RRHLQESGIN PYPCSFEVTG HSRQIIEHFK EDAEEKVSVA GRIMAIRRMG KASFFHIQDS DGRMQIYLKK DEVGDDAYAT FKLLDIGDIV GVNGYTFRTR TGEISVHAES FELLCKSLRP IPVAKEKEVE GEKVVFDAFA DRELRYRQRY VDLIVNPEVR STFIKRSAIV SHIRSFFTSQ GWLEVETPIL QPIYGGAAAR PFTTHHNALD MQLYLRIANE LYLKRLIVGG FDGVFEFAKD FRNEGIDRFH NPEFTQVELY VAYKDYDWMM RLVEELFQQT AIAVNGTAMT TFLGHEISLE APFRRLTIAD SIREYTGAEI EGKTETELRN LAKDLGLELD PKIGSGKIID EIFGEFVEPK LIQPTFITDY PTEMSPLAKP HRSKPGLVER FELIAGGKEI CNSFSELNDP VIQRQRLEEQ ASLRQRGDDE AMVVDEDFLR ALEYGMPPTA GLGIGIDRLV MLITGEESIR DVIFFPHLKP E
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