| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1292 |
|---|
| Symbol | |
|---|
| ID | 3744766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1461451 |
|---|
| End bp | 1463595 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637769328 |
|---|
| Product | methylmalonyl-CoA mutase |
|---|
| Protein accession | YP_375195 |
|---|
| Protein GI | 78187152 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.816153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG ATTTTTCATC CATTGATATT TTCAGCGGGG CAGTACCCGC AGCACCGCAG
CACGACGAGG CTGAAACGCC ACGCTGGCTC ACCCCGGAAG GACTCGGGGA ATGCCGCTCC
TATGCCGGCC GTGAAGAAGC TTCTGAAGCG CACCTGCAGG GTGCGCCGGG GTTCCCGCCC
TTCACCGCAG GCCCCTACTC CACCATGTAC ACGACCAGGC CGTGGACCAT CCGGCAGTAT
GCAGGGTTTT CAACGGCCGA GGAGTCAAAC CTCTTCTACC GCCGCAACCT TGCCGCAGGC
CAGAAAGGTC TCTCGGTCGC CTTCGACCTT CCGACCCACC GCGGCTATGA TTCCGACCAC
CCGAGGGTGG TGGGAGATGT CGGCAAGGCC GGAGTCGCCA TCGACTCGGT CGAGGACATG
AAGATCCTCT TCGACGGGAT TCCACTCGGC GACATCTCCG TTTCGATGAC CATGAACGGG
GCGGTGCTCC CCGTCATGGC ATTCTACATC GTCGCCGCCG AAGAAGAGGG CGTGGGGCCG
GAAAAACTCA GCGGAACCAT CCAGAACGAC ATCCTCAAGG AGTTCATGGT CCGCAACACC
TACATCTACC CTCCGGCGCC TTCAATGCGT ATCATTGCCG ACATCTTCCG CTATACGAGC
GCCACGATGC CGAAGTTCAA CTCCATCAGC ATCTCCGGCT ACCACATGCA GGAAGCCGGT
GCCACGGCGG ACCTGGAGCT GGCCTTCACC CTTGCAGACG GACTCGAGTA CCTCCGTACC
GGCCTCGAAG CCGGCCTGGA TATCGACGCC TTCGCCCCCC GCCTCTCCTT TTTCTGGGCC
AGCGGCATGA ACTACTTCAC CGAGATCGCC AAACTGAGGG CGGCAAGGAT GCTGTGGGCA
AAAATCGTGA AGCGCTTCAA TCCGAAGAAC CCGAAATCGC TGATGCTGCG CTCCCATACC
CAGACCTCCG GCTGGAGCCT CACCGAGCAG GACCCGTTCA ACAATGTTGC GCGAACCTGC
ATAGAAGCTC TCGGCGCCGC ACTCGGCCAT ACCCAGTCGC TGCACACAAA CGCCCTCGAC
GAAGCCATCG CGCTGCCCTC CCCGTTCTCG GCGCGCATCG CCCGCAACAC CCAGCTCTAC
CTGCAGGAGG AGACCGACAT CACCCGGAGC ATCGACCCGT GGTCGGGCTC ATACTATGTC
GAATCCCTCA CATCCCAGCT TGCATCGAAA GCGTGGAAGA TCATTGAAGA GATCGAAGAA
GCCGGAGGCA TGGTGAAGGC TATCGAGCAG GGCATCCCGA AACGGCAGAT TGAAGAGGCG
GCCGCCCGCA AGCAGTCCCG AATTGATCGC GGAGAAGACA GCATCATCGG CCTGAACGCC
TACCGTACCG CTGAGAAAAC CGACATCGAG CTGCTTGAGG TCGACAATAC CATGGTGCTC
CATAAACAGA TGGAACGCCT TGAAAGAATC AAGGCCACCC GCAACCCGGA GGAAACCCAG
GCAGCGCTCC GGGCCATGAC GGAATGCGCC CGATCGGGAG AGGGAAACCT TCTCGCCCTC
GCCGTTGATG CTGCGCGCAA ACGCGCCACA CTCGGAGAAA TATCCTCAGC CTGCGAAGAG
GTGTTCGGCC GATACCGCTC AACAGTCAGG CTCAACAGCA ACGTCTACAT GTCAGGAATG
GAACACAACC ACCGGTTCAG GGAGGCACAG GACCTTGCCG ACACCTTTGC ATCCATCGAA
GGCCGACGGC CGAGGATCAT GGTCGCCAAG GTCGGACAGG ACGGCCATGA CCGCGGAGCC
AAAGTCATTG CAGCCGGCTT TGCCGACGTC GGCTTCGACG TCGACATCAG CCCGCTCTTC
CAGACCCCTG AAGAGGTCGT CCAGCAGGCG CTCGACAATG ATGTGCACCT CATCGGCATC
TCCAGCCTTG CAGCCGGCCA CAAGACCCTC ATCCCGGAGA CAGTCAAGCT GCTCAGGGAG
GCAGGACGGG AGGATATTCT GGTGATTGCC GGCGGCATCA TACCCGAACG CGACCATGCG
TTCCTCCGTA GAGAGGGAGT AGCGGCGATA TTCGGGCCGG GTACCGTCAT TGCCGATGCA
GCCATTGAGA TTCTCAGCAT CCTCATAGGA AAAACCGGCG TATGA
|
|---|
| Protein sequence | MKPDFSSIDI FSGAVPAAPQ HDEAETPRWL TPEGLGECRS YAGREEASEA HLQGAPGFPP
FTAGPYSTMY TTRPWTIRQY AGFSTAEESN LFYRRNLAAG QKGLSVAFDL PTHRGYDSDH
PRVVGDVGKA GVAIDSVEDM KILFDGIPLG DISVSMTMNG AVLPVMAFYI VAAEEEGVGP
EKLSGTIQND ILKEFMVRNT YIYPPAPSMR IIADIFRYTS ATMPKFNSIS ISGYHMQEAG
ATADLELAFT LADGLEYLRT GLEAGLDIDA FAPRLSFFWA SGMNYFTEIA KLRAARMLWA
KIVKRFNPKN PKSLMLRSHT QTSGWSLTEQ DPFNNVARTC IEALGAALGH TQSLHTNALD
EAIALPSPFS ARIARNTQLY LQEETDITRS IDPWSGSYYV ESLTSQLASK AWKIIEEIEE
AGGMVKAIEQ GIPKRQIEEA AARKQSRIDR GEDSIIGLNA YRTAEKTDIE LLEVDNTMVL
HKQMERLERI KATRNPEETQ AALRAMTECA RSGEGNLLAL AVDAARKRAT LGEISSACEE
VFGRYRSTVR LNSNVYMSGM EHNHRFREAQ DLADTFASIE GRRPRIMVAK VGQDGHDRGA
KVIAAGFADV GFDVDISPLF QTPEEVVQQA LDNDVHLIGI SSLAAGHKTL IPETVKLLRE
AGREDILVIA GGIIPERDHA FLRREGVAAI FGPGTVIADA AIEILSILIG KTGV
|
|---|
| |