| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1176 |
|---|
| Symbol | |
|---|
| ID | 3744369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1333654 |
|---|
| End bp | 1335558 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637769211 |
|---|
| Product | alpha-amylase family protein |
|---|
| Protein accession | YP_375081 |
|---|
| Protein GI | 78187038 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.470418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.104787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATAGAG AGCATTTAGA GATTGTCCAG AGCGCCCTTC GGGCCCTCTC CCCCGCCCCG
GAATCATCCA GCTACCGCGT CCCCCGGATG TGGGTGGATG AACAACCCGG AGCAATCGCA
GTAGATCCGG TCCTCTGGCA TCTGGAGCAG CTTGGGGAAC TGCTGGCCTC CCCGTCAGCG
GACACAGCCG TCGACTGGCA CCGGGAAGCC GTCGTCTACA ACCTCTTTGT GCGCTTCGGC
TGCGCCTTCG ATCACGACGG GGACGGCCGG ATAGCCCCGG AGCCCCTCGC TTCCGGCTTC
AGGGAGACCG GCACGCTCCT GAAGGCGATC GCAATGCTTC CTTATATAAA AAAACTTGGT
GCCAATACCA TCTACCTGCT CCCTCTCACC ACCATAGGCG AAAAAGAGAG GAAAGGCACC
CTCGGTTCCC CCTACGCCGT TCAGGATCCG CTACGGCTCG ACCCGATGCT GGCTGAGCCA
GCTCTCGGAC TCCAGCCCGA AACCCTCCTC AAGGCATTCA TTGAGGCCGC ACACCTTCAG
GGCATGCACG TGGTGCTGGA GTTCGTCTTC CGTACTGCCT CCGTCGACAG CCGCTGGATA
GGGGAACATC CAGAGTGGTT CTACTGGCTG AAAGAGAGCG TTCCCCCGGA ATCCTACGGC
CCGCCGCACT TTCAGCAGGA TACCCTGAAC GAGATCTACA GCCTCGTCGA CCGCCACGAG
ATGGAAGGCC TCCCTGCCCC TTCGGAAAGC TATCGCAACC AGTTCGCCCG CCGCCCCGTT
ACGGCCGAGC CCCAAAAGGA AGGCGGGTAT AGGGGAATCG ATGCCGACGG TGAAGCATGC
AGAATCGCCA GCGCGTTTTC CGACTGGCCG CCGGACGACC GGCAGCCCGC CTGGACCGAT
GTCACCTACC TCCGCATGCA TACACCTCCG GAGTTCGACT ACATCGCCTA CAACACCATA
CGCATGTACG ATGCCGCGCT CACAAACCCT GAAACCCACA ACACCGGTCT CTGGGAGGAG
ATCTCGGGCA TCATCCCCCG CTTCCAGCGT GAGTACGGCA TCGACGGCGC CATGATGGAC
ATGGGCCACG CACTGCCGGC AGCACTGAAA AAAGAGATCG TCACGCGGGC ACGGAAAACA
AGGCCCGATT TCGTCTTCTG GGATGAGAAC TTCGACCCGA CCCCGGCCAT ACGCGACGAG
GGCTTCAACG CCGTCTTCGG CTCGTTCCCC TTCGTCGTCA GCGACATCAT CTATATCAGG
GGGCTGCTCA ATTTCCTCAA CAAGACCGGC GTGGCCCTAC CCTTTTTCGG GACCGGAGAA
AACCACAACA CCCCCAGAGT TCCGTTCCGC TACGGTGAAC AGGAGGCAGG AAGAAGCTTC
TCGACCTTCA TCTTCACCCT GTCAGCCGTC CTTCCTGCCG TTCCCTTCAT CCACTCCGGC
ATGGAGATCC TTGAATGGCG TCCGGTCAAC CTCGGGCTCA ACTTCAATGA TGAAGACCGC
GCCATGTGGC CCCCGGAAAC CCTTCCCCTC TTCAGCGCCG CAAGCTTCGA CTGGGAGAGG
ACGAACAGCC TGCAGCCGCT GAACGGGTAC GTCAAAAAAG TACTCGACGT GCGAAGCCGC
CATCTCGACA TCATACTCTC CGGAGAGCAG GGCTCCCTCG TTATCCCCAT CGTCTCCGAC
GACGCCATCT TTGCACTGAA GCGGACGGCC GGAGGCCGCT CGCTGCTCTT CATCGGCAAC
AGCGCCATTG ACAACCCGAG AACCGGCTAC ATCGAGTTCA AAAAAGAATC CGCAGCCCTT
GACGACCTGC TGACCGGAAC AATATGCATG GTAGAAAATC ACCGGCTCGA ACTCACCCTC
AAGCCCGGCC AGTGCATGCT CTTTCTCCTT CCGGATGAAA ATTGA
|
|---|
| Protein sequence | MHREHLEIVQ SALRALSPAP ESSSYRVPRM WVDEQPGAIA VDPVLWHLEQ LGELLASPSA
DTAVDWHREA VVYNLFVRFG CAFDHDGDGR IAPEPLASGF RETGTLLKAI AMLPYIKKLG
ANTIYLLPLT TIGEKERKGT LGSPYAVQDP LRLDPMLAEP ALGLQPETLL KAFIEAAHLQ
GMHVVLEFVF RTASVDSRWI GEHPEWFYWL KESVPPESYG PPHFQQDTLN EIYSLVDRHE
MEGLPAPSES YRNQFARRPV TAEPQKEGGY RGIDADGEAC RIASAFSDWP PDDRQPAWTD
VTYLRMHTPP EFDYIAYNTI RMYDAALTNP ETHNTGLWEE ISGIIPRFQR EYGIDGAMMD
MGHALPAALK KEIVTRARKT RPDFVFWDEN FDPTPAIRDE GFNAVFGSFP FVVSDIIYIR
GLLNFLNKTG VALPFFGTGE NHNTPRVPFR YGEQEAGRSF STFIFTLSAV LPAVPFIHSG
MEILEWRPVN LGLNFNDEDR AMWPPETLPL FSAASFDWER TNSLQPLNGY VKKVLDVRSR
HLDIILSGEQ GSLVIPIVSD DAIFALKRTA GGRSLLFIGN SAIDNPRTGY IEFKKESAAL
DDLLTGTICM VENHRLELTL KPGQCMLFLL PDEN
|
|---|
| |