Gene Plut_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0309 
Symbol 
ID3746174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp316029 
End bp318083 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content62% 
IMG OID637768347 
Producttransketolase 
Protein accessionYP_374240 
Protein GI78186197 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000137507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAGGA GACAGGAAAA ACCGCCGGAA CCCGACATGG CACCAGATGC TTCAGACCAG 
CTGGCGATCA ACACCGTCAG AATCCTTGCC GTCGACATGG TGGAGCGGGC ACAGTCCGGC
CACCCCGGCA TGCCGCTCGG CGCAGCCCCG ATGCTCTTCG TGCTCTTCCG ACACATCATG
AGACACAACC CCCGGAACCC TTCATGGCTT AACCGGGACC GGTTCGTCCT CTCCGCAGGG
CACGCATCCG CAATGCTCTA TGCTATGCTC CATCTGTCGG GATACGATCT CACAATGGAG
GACCTGCAGC AGTTCCGACA GCTTGGAAGC CGCACGCCCG GTCATCCCGA ATACGGACTG
ACCCCGGGAG TGGAAACCAC CACGGGGCCG CTCGGGCAGG GCATCGCCAC CGCCGTCGGC
ATGGCCATTT CGGAACGGCA TGCCGCAGCC ATCCTGAACC GGGGCGAAAT TGAGCTCATC
GACCACTATA CTTATGTCAT CTGCAGCGAC GGGGACATGA TGGAGGGCAT CGGGAGCGAA
GCAGCCTCGC TTGCCGCCCA CCTGCAGCTC GGCAAACTGA TCTGCCTGTA CGACAGCAAC
GGAATATCGA TAGAGGGCCC GACTTCCCTC GCCTTCACCG AAGACACCTC GTCCCGGTAC
CGGGCCTATG GCTGGCATGT TCAGGAGGTT GAGGACGGCA ACGACACCAA AGCCATACAT
GATGCGGTGA TGCTGGCCAG GGAAGAGAGC CGGCGCCCCA GCTTCATCAG GGTCCGGACA
CACATCGGCT ACGGCAGTCC CAACCGTCAG GACACGGCAA AGGCGCACGG AGAACCGCTC
GGCAAGGAAG AGACTGCGCT GCTGAAAGCA GCCTTCGGCT TTCCGCCGGA AGCGCGGTTC
CACGTCGCCC CCGAAGTCCG GGAACACTTC CGCCCCGTTC GGGAGCAGGG CGAAGTCCTC
GAAGCAACAT GGAACAGCAT GTTCGGCCAC TATGCCCTCC GCTTCCCCGA AATAGCCCAA
AGCCTCCGGG ATCGGCTGGA GGGCAGGCTC CCTGAAGAGT GGGAGGACGC ACTTCCCTCA
TTCACTCCCC CGCAGGAGAG GGCAACCCGC CAGGCGTCGC AGGCCTGCCT GGAAGCCATG
GCGGAAACCA TTCCTTTCCT CATCGGCGGT TCGGCTGATC TCGGCTCCTC CTGCGGCACA
TTCCTCAAGG GAGCAGCGAG CTTCACAGCC GAAAATCCCG GAGGGGCCAC CATCCATTTC
GGAGTCCGGG AACACTCCAT GGGAGCCATC CTCAACGGCA TCGCGCTCTC AGGAATCCTC
CGTCCCTACG GCGCGACATT CCTCATCTTC TCCGATTACA TGAAACCGGC GATCCGTCTC
TCTGCTCTCA TGCGGCTCCC CGTGGTATTC ATCTTCACCC ATGACAGCAT AGGCCTCGGA
GAGGACGGAC CGACGCACCA GCCGGTCGAA CAGCTTGCCA TGCTCAGGGC CATGCCGAAC
CTCACCATCA TCCGGCCGGC GGACGCCAAC GAGACGAAAG CGGCATGGGC TCTGGCACTC
GGCCTCAAGG GTCCCGTCGC CCTTGTCCTC ACCCGCCAGA AGCTCCCCGT GCTTGACAGG
GAAAACGACA GCTGCATGGA GGAAGTGGCA AAGGGAGGCT ACATCCTCTC TGACTGGAGT
GGCGCACCGG CGCCGGAAGA TGCGGCCATC ATCATAGCCA CAGGCTCGGA AGTCCACATC
TCCCTTCAGG CGAAGGTGAT GCTGGAGAAA GAGGGCATCG CGGCAAGGGT GGTCTCCATG
CCTTCACGCG AACTGTTCCT CCTCCAGCCG GAAGCGTGGC AGCACCGGGT GCTGCCTCCG
AGGGTAACCA CCCGTGTCGT CGTCGAGGCT GCCTCACCGT TCGGATGGGA CCGCTTCAGC
GGTCCGTCGG GATGCATCAT CGCCATCGAC CGGTTCGGAG CGTCCGGACC GGGCGGAGCT
GTTATGGAGG CACTGGGCTT CACTGCCAGC CATATCGCCG AAACGGTCCG CGAGCTCAGG
AAAAACAAAA CATGA
 
Protein sequence
MKRRQEKPPE PDMAPDASDQ LAINTVRILA VDMVERAQSG HPGMPLGAAP MLFVLFRHIM 
RHNPRNPSWL NRDRFVLSAG HASAMLYAML HLSGYDLTME DLQQFRQLGS RTPGHPEYGL
TPGVETTTGP LGQGIATAVG MAISERHAAA ILNRGEIELI DHYTYVICSD GDMMEGIGSE
AASLAAHLQL GKLICLYDSN GISIEGPTSL AFTEDTSSRY RAYGWHVQEV EDGNDTKAIH
DAVMLAREES RRPSFIRVRT HIGYGSPNRQ DTAKAHGEPL GKEETALLKA AFGFPPEARF
HVAPEVREHF RPVREQGEVL EATWNSMFGH YALRFPEIAQ SLRDRLEGRL PEEWEDALPS
FTPPQERATR QASQACLEAM AETIPFLIGG SADLGSSCGT FLKGAASFTA ENPGGATIHF
GVREHSMGAI LNGIALSGIL RPYGATFLIF SDYMKPAIRL SALMRLPVVF IFTHDSIGLG
EDGPTHQPVE QLAMLRAMPN LTIIRPADAN ETKAAWALAL GLKGPVALVL TRQKLPVLDR
ENDSCMEEVA KGGYILSDWS GAPAPEDAAI IIATGSEVHI SLQAKVMLEK EGIAARVVSM
PSRELFLLQP EAWQHRVLPP RVTTRVVVEA ASPFGWDRFS GPSGCIIAID RFGASGPGGA
VMEALGFTAS HIAETVRELR KNKT