Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0181 |
Symbol | rplD |
ID | 3746290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 188627 |
End bp | 189253 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637768220 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_374114 |
Protein GI | 78186071 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000196789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTA AAGTCTTAAA TACTGCCGGT GCTGAAACCG GGGAAGTGGT TACGCTCCGT GACGATATAT TCGGCGCTGA AGTATCCGAG CATGCGATCT GGCTCGACGT CAAGTCGATC CTCGCGAACA AAAGGCAGGG TACGCATAAG TCGAAGACCC GCGCAGAAGT ACGGGGCGGC GGACGCAAGC CCTATCGCCA GAAGGGAACC GGCAACGCCC GTCAGGGATC GACCCGTTCT CCCCTGATGA TCGGCGGCGG TACTATTTTC GGCCCTACCC CTCATGGCTA TGACCAGAAG GTCAACCGCA AGGTCAAGCA GCTTGCACGC CGTTCAGCCT TCAGCGCCAA GGCGCAGGAA GGCAGGATCC TCATCGTCGA GGACTTCGCT CTCGCAGAGA TCAAGACGAA GCCGGTTGCC GACATGCTGA GGAATCTGGG GCTTGATGCA AAGAAGATCC TTATGCTGAC CCCGGACTAC AACATGGTCA TCGCACGTTC GGGCCGCAAC ATCGAGGCGC TCAACATCAT GACTGCCGAG AAGGCTTCGA CCTACGACAT TCTCAACAGC CATACCGTGC TGTTCCAGAA GACCGCATTG AAGAAATTAG AAGAGACTTT AGGGTAA
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Protein sequence | MELKVLNTAG AETGEVVTLR DDIFGAEVSE HAIWLDVKSI LANKRQGTHK SKTRAEVRGG GRKPYRQKGT GNARQGSTRS PLMIGGGTIF GPTPHGYDQK VNRKVKQLAR RSAFSAKAQE GRILIVEDFA LAEIKTKPVA DMLRNLGLDA KKILMLTPDY NMVIARSGRN IEALNIMTAE KASTYDILNS HTVLFQKTAL KKLEETLG
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