Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0012 |
Symbol | |
ID | 3745718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 16195 |
End bp | 17907 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637768040 |
Product | ribonuclease E and G |
Protein accession | YP_373947 |
Protein GI | 78185904 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000376513 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.207191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA GTGTTAAAAA ACAGTTGCTG ATGAACAAGA CCGGCGACGA GATACAGGTT GCGCTGGTTG AGGACGGCAG GCTTGCTGAG CTGATCATCG AACGGCCTGA AAGCCGCCGC AGCATCGGTG ATATCTATCT CGGCAGGGTT CACAAGGTCA TCGAAGGCCT CAAGGCCGCC TTTGTGGACA TCGGGCAGAA GTCGGACGGC TTCCTGCATT TTTCCGATGT CGGCACTACA ACCGAGGATT ACCGGGCTCT CATCGAGGAC GATGATGACG ACGACGAGAC CGCAGCAGAC GAGACCGGTA CGGCAGAAGA CGGCGCCGAT GAAGAAGAGG CCCCCGTTGC CGCCGGGGCT CCCCAGGAGC AGCAGGGTTC GCGGCAGTCT TCACGGAGCG GCGGGCGCAA GCCCCAGCCC CAGCAGCGCA AAGAGGACGG TGCGGAAAAA CGACAGTCCT ACACCCAGCT GATTGCCGGC AAGCTCAAGG CCAACGACTC GATTCTTGTC CAGGTCATCA AGGAGCCCAT CAGCACGAAG GGGTCGCGCC TGACTTCAGA TATCACCATC GCCGGCCGGT TCATGGTGCT CCTGCCCTTC GGAGGGGGGC AGGTGGCTGT CTCACGCCGG GTCGTTTCCC GCAAGGAGCG GGCCAGGCTG AAAAAGCTTG TCCGCTCTAT GCTGCCTGAA GGGTTCGGTG CGATCATCCG CACGGTTGCC GAGATGCAGG AGGAGACGCT GCTCAAGCAG GATCTCGAAA AGCTACTGGC CAAGTGGACG CAGATCGAGG AAAAACTCAA GGATGCCGCA CCTCCGCAGC TCATTTTCAA GGAGGACACC ATCATTTCGA GCGTGCTTCG CGACTCGCTG ACCTCCGATG TGACTGAAAT CGTCGCCAAC TCTCCCTCCA TCCACAAGGA GACCCTCAAC TACATTGAGT GGGCCGCTCC CGAAATGGTG AAGAACGTGT CGCTCTATCA GGGCAAGCTG CCCCTATTCG AGGGTTACGG CATCGCCAAG GACGTTGAGT CAATTTTCTC GCGCAAGGTC TGGCTGAAAT CCGGCGGCTA CATCATCATC GAGCATACTG AAGCTATGGT AGTGGTCGAC GTCAACAGCG GACGCTACGC TGCCAAACGG GAGCAGGAGG AGAACTCGCT GCGCACCAAC ATGGAGGCCG CCCGTGAGGT GGTCCGCCAG CTCCGCCTCC GCGACATCGG AGGCATCATC GTGGTCGACT TCATCGACAT GATGGACGCG CGGAACTCAA AGAAGGTATA CGATTCGATG AAGGGTGAGC TGCGCAATGA CCGTGCAAAG TCGAACATCC TCCCGATGTC GGATTTCGGC ATCATGCAGA TCACCCGCGA ACGCATCCGC CCGAGCCTCA TGCAGCGAAT GGGAGACCAG TGCCCCGCAT GCGGTGGATC GGGTGTCGTG CAGGCCCGCT TCACCACGAT CAACCAGATT GAACGCTGGC TGCGCAAGTA CGCGCTGCAG CATGCCATGA AGTTCCAGCA GCTCGACCTC TACGTGAGTC CCACTGTGGC TGAACCACTG AAAAACAGCG ACATGAACAC TGAACTGAAG TGGTTTCTCC AGCATATGCT TTTCGTCCGG GTCAAACAGG ACGAAAGCCT GCGGAGCGAC GACTTCCGAT TCTACACCAG AAAAGACAGC AGAGACATAA CCGCCGAATA CGGCGACCTT TAA
|
Protein sequence | MKKSVKKQLL MNKTGDEIQV ALVEDGRLAE LIIERPESRR SIGDIYLGRV HKVIEGLKAA FVDIGQKSDG FLHFSDVGTT TEDYRALIED DDDDDETAAD ETGTAEDGAD EEEAPVAAGA PQEQQGSRQS SRSGGRKPQP QQRKEDGAEK RQSYTQLIAG KLKANDSILV QVIKEPISTK GSRLTSDITI AGRFMVLLPF GGGQVAVSRR VVSRKERARL KKLVRSMLPE GFGAIIRTVA EMQEETLLKQ DLEKLLAKWT QIEEKLKDAA PPQLIFKEDT IISSVLRDSL TSDVTEIVAN SPSIHKETLN YIEWAAPEMV KNVSLYQGKL PLFEGYGIAK DVESIFSRKV WLKSGGYIII EHTEAMVVVD VNSGRYAAKR EQEENSLRTN MEAAREVVRQ LRLRDIGGII VVDFIDMMDA RNSKKVYDSM KGELRNDRAK SNILPMSDFG IMQITRERIR PSLMQRMGDQ CPACGGSGVV QARFTTINQI ERWLRKYALQ HAMKFQQLDL YVSPTVAEPL KNSDMNTELK WFLQHMLFVR VKQDESLRSD DFRFYTRKDS RDITAEYGDL
|
| |