Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4237 |
Symbol | |
ID | 9140959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5411388 |
End bp | 5413013 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Protein of unknown function DUF1800 |
Protein accession | YP_003632243 |
Protein GI | 296124465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000229991 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGCA ATCGTGTCCA TGAAGCACAG CAGTCGGGAT GGTCGTCACT AGCCGCCCGG CATCTCCTCG CGAGGACGGG ATTTGGCTTC GATCTGAAGC ACGAAGAGAA ACTGGCTGCC TTATCACGAG AACAGGCAGT CGATCAGCTT CTGGAAGACG CTCAGAAGGC CCCTTGCCCT ACGCCGCCCG AGTGGGTCAA AACACCGTGG GTGAACACAG AGCGGCGATA TGCAGATACC ACTGCCGAAG AATTTCGCGG CAAGCATGGT GCGACCAACG GTCGGTATGC CCGTGAGATT GCTGATCTGC GCCGCTGGTG GGTGAATGAG ATGCTGACGT CTCTGGTACC ACTGCGGGAG ATGATGACAC TCTTCTGGCA CAGCCACTTT GCCTCGAGCA TTGGCAAGGT TCTCATATCT CAAGCCATGT ACGAGCAGAA TGCGACTCAA CGAAAGCATG CGTTGGGGAA CTTTCGTCAG CTGCTGAGAG CCATGACGAT TGATGGCGCC ATGATGATTT ATCTCGATCT GGAGGACAGC GAAAAAACAC AGCCCAATGA GAATTACGCC CGCGAACTCT TTGAACTCTT TGCTCTCGGG CACGGTCATT ACACTCAGGC CGATATTCGC GAGGCGGCTC GTGCACTCTC AGGGTGGCAG CTGAATGCTC CACCTGGCAC AACCTTACCC CAGAGACCAA CCAACCCAGC GGATAATCGA CGCTTTACGC GCGATGGTAT TGTCGCAGAA CTGGTGGTCG AGCGGCACGA TTCGGGCACT AAAACAATCT TTGGAAAAAC AGGCACATTC GGTCTCGATG AAGTGATCGA ACTCACAGTC AATCACCCGG CTTGCGGATT ATTTCTTGCT GAAAAACTGG CCAGCTACTT TGGTCTGAGT GATGAAACCG GTCGAGTCCA ACAGCAGATG GCCGAGGTGT TCCGATCAAC CGGTGGTGAG ATCGCACCGA TGCTGCGCGT GCTGTTCACT GCTGACGAGT TTTACACCGA TGGGTCCAGA AATCGTCTCA TCAAGAGTCC GGTCGTGCTC TGGGTGAGCA CCTGTCGTCA ATTGCAACTC GACACAACCT ATACGCGAGG AGTCAACAAA TATCTGGCAG CCCTGGGTCA GGAACTCTTT GAGCCACCCA ATGTGAAAGG CTGGCCAGGT GGTGAAACAT GGATCAGCGC TGGAACTCTG GCACTGAGAT ACCACCTCAC GGATATTGTT CTGGAATCGA AAGAGCCTCC AGGAATGGAC CCCATGGGGC GGGATCGCGG TCGGCCGGTC ATGCTTCCCA AAGATCCTGC GGAGCGAGCC AGATTTCTTG CTCGTATGGG AGGAGGAATG TCTGAGGGTG AAGGGATGAT GGCACCTCGT CGCGGCGAAC GGGAAACCGG CCCCGCTTAC GAAGTCAAAT TCTCGCCAGA CAAACTCTTT CCTGCCGGTC TCCCGGACTC GTCTGCCGAT CTGGCTGACC AACTGCTGAA TCGATTGCTG GTGGATTTAC CACGGGCAGA ACTTCGGGCA GCTGCCATGG AGGCGGCGAC ACGAAACGTG GGACCTTTGC GGGTTCAGGC AGTCCTGCGG CTGATCCTCA GTTCGCCCGA TTACCAGCTC ACATGA
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Protein sequence | MPRNRVHEAQ QSGWSSLAAR HLLARTGFGF DLKHEEKLAA LSREQAVDQL LEDAQKAPCP TPPEWVKTPW VNTERRYADT TAEEFRGKHG ATNGRYAREI ADLRRWWVNE MLTSLVPLRE MMTLFWHSHF ASSIGKVLIS QAMYEQNATQ RKHALGNFRQ LLRAMTIDGA MMIYLDLEDS EKTQPNENYA RELFELFALG HGHYTQADIR EAARALSGWQ LNAPPGTTLP QRPTNPADNR RFTRDGIVAE LVVERHDSGT KTIFGKTGTF GLDEVIELTV NHPACGLFLA EKLASYFGLS DETGRVQQQM AEVFRSTGGE IAPMLRVLFT ADEFYTDGSR NRLIKSPVVL WVSTCRQLQL DTTYTRGVNK YLAALGQELF EPPNVKGWPG GETWISAGTL ALRYHLTDIV LESKEPPGMD PMGRDRGRPV MLPKDPAERA RFLARMGGGM SEGEGMMAPR RGERETGPAY EVKFSPDKLF PAGLPDSSAD LADQLLNRLL VDLPRAELRA AAMEAATRNV GPLRVQAVLR LILSSPDYQL T
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