Gene Plim_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4122 
Symbol 
ID9140842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5287926 
End bp5288360 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content58% 
IMG OID 
ProductTadE family protein 
Protein accessionYP_003632132 
Protein GI296124354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGG AACAGCACGT GAAGACGAGA TTGCGCCATT CATCGGGGCG CCGCTCCAGC 
CGACTCGGCG CTGCCACGGT CGAATTGGCC ATCTGCCTCC CCATCATCAT TCTGGTGGTC
TTCGGCTCGA TTGAATCCGC CAACGCGATC TTTCTCAAAA CCACACTCAC ACAAGCCAGT
TATGAAGCGG CCCGCACCGT CACTTCAACA GGCGGCACCA TGGCTGCGGC CCGCGCTCGC
GGAGAAGAAG TTCTGGCGAG CCGCAATGTC TCCGGAGCCA CAATCACCTT CACTCCCAAC
GTGACTGCCA ACACGCCCAC AGGGACACTC GTCACTGTGG AAGTCAGTTC GCCCGCCACG
AGCCTTTCGG GAATCTTCGA CTGGTTTACC CGTCTGTCAA ACATCAAAGC CAGTACCTCG
ATGGTACGCA CTTGA
 
Protein sequence
MIGEQHVKTR LRHSSGRRSS RLGAATVELA ICLPIIILVV FGSIESANAI FLKTTLTQAS 
YEAARTVTST GGTMAAARAR GEEVLASRNV SGATITFTPN VTANTPTGTL VTVEVSSPAT
SLSGIFDWFT RLSNIKASTS MVRT