| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4111 |
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| Symbol | |
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| ID | 9140831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5272987 |
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| End bp | 5275212 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003632121 |
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| Protein GI | 296124343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGC TCATGCGTTT CTGGCGAAGC GTACAGTATC GCAAAGGGCT GATTATTCTC
GCCGTCCTGG CAGCCAGTGC TCTAGGTGCT GCTTACTACA TCGTTTCGAC TAGATACTAC
GAGTCGAAAG CCGAACTTCT CATCCTGCAG ACAGGTAGCA AAGTCCTGGA TGGTGCTCCC
GAAGGAGCTG CCATGAAAGA CCTCATGCCC ACTTATGAAC GCATCATGCA GGGCGATATC
GTTCTGGCAG ATGCGGCTCA AAAGCTGCCA GTGAAATACC GCACCGATTT TCGAGGAGTC
GCCCCTGCCG ACTGGCCGGG CGTCCTCAAG AAAATGGTAA CTGTCCGCTC TGCCCGGCAG
ACCAACGTGC TCGAACTGAC TTGCCGCTCG CGGGATCCCA AAGCCGCCGC TGCCATTTTG
TATGCCGTTC TCAGTGCCTC CATCGATTTT CTCAATAAGA ACCACCAGGG AACTTCGCAG
GAAATCCTGC AGATCCTCTC GAAAGAAAAA GTCGAACTCG AACAGAAACT GGCCACTAGA
GAGGCCGAAC TCATCGAGCT GCGCGGGCGC TCATTGACCT TCGTCAGCAA CGGTACAGAT
AACGCCACAA ACGTGGCCGT GGCGCGTGTC GTCAGACTCA ACGAAGAGTT CATGAAGGCC
AAAGAAGAAA CTTTGCGAGC GACGGCTCAA CTGGCAGCTC TCGAACAGGC CATTTCCCGC
GGTGAAGACG TCCTGCAGTT TGCTATGGCC AGTCTCGATG TCGTGGGCAA ACAGTTCATG
ATGGGAGAAC TGGGCCTCGA TTCCCAGGAA GGCATGGCCA TCAGTCGTAT GACGGAACAA
CTGCTGCAAG AGCAGGCCAA AATGCGGACG GCTCTCGAAA GCTATGGCCC CAATCATCCC
AAAGTCATGG AACTTCGCGA TGCCATTCAG GCCAAAGAGC AGTGGATGGC CAGCCGCAGG
CAAGTCACCA TCGACCGGCT CAAACAACTC CGCATGGAAG AACTCACGCC GCGTCTGCTG
CAAATGGCCA GACAACGCGT GCAGCATTCC CAGCAGCACG AGGCCTCTGT CAGTGCTCAA
TTCGATATTG AAAGGCAGAA TGCACTTTCA CTCAACGGTG AACTCGCCAA GCTCGAAATT
CTGCAGATGG ATACCAAGCG TTTGCGCGCT TTTTACGATC TCGTCCTTGA GCGAATTCGT
GGCATTGATC TTGGTAAAGA CAAAGGCATT CGTACGGCTG TCGTCGGAGA ACCCAAGGTC
AATCCAAGGC CCGTGCATCC CAAATTGTCA CTGACAGTCG CTGTCTCTTT GATGGCCGGG
ATTTCTCTGG GCCTGGCATT GGTGTATCTC GCCGATCTCC TGGATGATCG TTTTCGCTCG
CCAGAAGAGA CCAGCTTGCA ACTGGGGGCT CCCGTCCTTT CGTTTATCCC ATCGCTTCCT
ACATACGATG GGAACGGCCT CGACTCTGTC CATGCCTTTG TCGCTCCTCA CGAATCTTCG
ACAGAAGCTT TCCGCACCTT ACGTACGGCG ATTCAGTTTG CCGGAGACGA TATCCGCCGT
CTGGTCATCA CGAGTACCGA ACCTGGCGAT GGTAAGACCA CTGTCTCGAC AAACCTGGCT
GTGGCTTATG CTCAATCCGG CCGACGTACG ATCATCATCG ACTGCGATAT GCGCCGCCCG
GGCCTTTCCA AAACCATGAA GCTGCGCGGA TCGTATGGCC TCTCGACAAT CCTGCGAAAC
GACGATTCGA TTGAGAATTC TCTACGCAAC AATGTGGTGG TTTCTGATCT CGCAGGACTC
GATATCATCC CAGCCGGGCC CAGGCCGGCG AATCCTCTTG AACTCCTTTC CTCAACCCGC
TTCAGTGAAC TTCTAGCCTA TGTGGAATCT CAATACGACC AGGTTCTGAT CGACGCTCCT
CCCATTCTGG CAGTCAGCGA TGCTGGCGTG TTAGGACGCA TGGTCGATGG CGTGGTGCTC
GTTGTCAGAC CCGATAAAAA TCAGCGGCGG TCAGTCATCC GTGCTGCCGA AACACTGCGG
ATGTGGGGCA ATAACCTGCT CGGTCTGGCC CTCAATAACA TGTCCAGCGA TCGGGCTGGT
GGGTATGGCT ACGGCTACGG TTATGGCTAT GGCTACGGTC ATACCGATAC CGATGGTGAT
CACGATGACT TGCTCGATGA TCATGCTTCG TCACATTCGA GTTATTCTTC CAGGACGGCC
GCCTGA
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| Protein sequence | MQTLMRFWRS VQYRKGLIIL AVLAASALGA AYYIVSTRYY ESKAELLILQ TGSKVLDGAP
EGAAMKDLMP TYERIMQGDI VLADAAQKLP VKYRTDFRGV APADWPGVLK KMVTVRSARQ
TNVLELTCRS RDPKAAAAIL YAVLSASIDF LNKNHQGTSQ EILQILSKEK VELEQKLATR
EAELIELRGR SLTFVSNGTD NATNVAVARV VRLNEEFMKA KEETLRATAQ LAALEQAISR
GEDVLQFAMA SLDVVGKQFM MGELGLDSQE GMAISRMTEQ LLQEQAKMRT ALESYGPNHP
KVMELRDAIQ AKEQWMASRR QVTIDRLKQL RMEELTPRLL QMARQRVQHS QQHEASVSAQ
FDIERQNALS LNGELAKLEI LQMDTKRLRA FYDLVLERIR GIDLGKDKGI RTAVVGEPKV
NPRPVHPKLS LTVAVSLMAG ISLGLALVYL ADLLDDRFRS PEETSLQLGA PVLSFIPSLP
TYDGNGLDSV HAFVAPHESS TEAFRTLRTA IQFAGDDIRR LVITSTEPGD GKTTVSTNLA
VAYAQSGRRT IIIDCDMRRP GLSKTMKLRG SYGLSTILRN DDSIENSLRN NVVVSDLAGL
DIIPAGPRPA NPLELLSSTR FSELLAYVES QYDQVLIDAP PILAVSDAGV LGRMVDGVVL
VVRPDKNQRR SVIRAAETLR MWGNNLLGLA LNNMSSDRAG GYGYGYGYGY GYGHTDTDGD
HDDLLDDHAS SHSSYSSRTA A
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