Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4084 |
Symbol | |
ID | 9140804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5239148 |
End bp | 5240290 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003632094 |
Protein GI | 296124316 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGTT CATACCGTCA CTCCGGCCGC AGGGTAGAAA CCTACTCACT CAAAGTGCGC CGGTCGTCAA GTGACTATCT ATACAACATT GATCCCGAGA AAGACCTCTT TATGAAAGTT CCTGATACTC CTCGTCACCG AGGCTTCACA CTCATTGAAC TCCTGGTGGT GATCGCGATC ATCGCCATTT TGATTGCTCT GCTGCTTCCC GCCGTTCAAC AGGCTCGGGA AGCAGCCCGG CGAACGCAGT GCCGTAACAA TCTCAAGCAG ATTGGCCTCG CTCTGCACAA CTATGAATCG ACATTCGGCC GCTTTCCCTG CGGCTGGAAC GGACACAACA ACGTCGCACA AAGCACCACG ATGCGCTGGA GTTTCCTGGC GTATATCCTC CCTTACGTCG ATCAGGCCAA CACGCTCAAT CAGTTGGATC TGAACTGGTC CCTCTATCCG CCCGGAGGTG GCCAGCCGCC ACGTGCCATG CACGTCAATA CGATCATGAC AAAGATTCCG ACCTATCTTT GTCCGAGTGA TCGCTCGGAC TATGTTTCTA GTCCCACAGG GGTGATTGAC TCTGCTCCTT CCAACTATAT GGCCTGCATG GGTTCTGGGA TAAACAATGT GGCCGATATC AGTGATGATG GTCAGAGCGA CGACCGTGCC GATGGTCTAT TCAGTTCCAT CTCCTGGCGA AGGATTGCCG ATTGTACGGA TGGCTTATCG AACACGGTTC TTTGCTCCGA AAGTCTATTA GGGATTGGTG GTGCCGACCC GGCTTCTACT GAGAGTCCTG ATGCACAGAC GCATATGGCA TTGGTCAGCC CTCCCACGAG TGTGACAATT GCCAATTGTG ATCAGGCGAG GCCCGCGAGT ATCGCCCGCT TCGTGGCCAG TCGAAATCGA GTCTGGGCGG GTCAGGCGTA CGAGAACACC GCTTACAACC ACTACTTCAC ACCGAACAGC CGGCGCTACG ACTGCTACTT CTGGGTGGCG CAAGGCTTCA AGGCCGCCCG CAGTCGGCAT ACAGGCGGTG TCCATACCCT CATGGGCGAT GGGGGAGTTC GATTCACCAG TGAAAACATC GACGCCACGA TCTGGCGGAA CATTGCCACA CGTTCTGGTA GTGAAGTCGT CAGCGAATTC TAA
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Protein sequence | MYRSYRHSGR RVETYSLKVR RSSSDYLYNI DPEKDLFMKV PDTPRHRGFT LIELLVVIAI IAILIALLLP AVQQAREAAR RTQCRNNLKQ IGLALHNYES TFGRFPCGWN GHNNVAQSTT MRWSFLAYIL PYVDQANTLN QLDLNWSLYP PGGGQPPRAM HVNTIMTKIP TYLCPSDRSD YVSSPTGVID SAPSNYMACM GSGINNVADI SDDGQSDDRA DGLFSSISWR RIADCTDGLS NTVLCSESLL GIGGADPAST ESPDAQTHMA LVSPPTSVTI ANCDQARPAS IARFVASRNR VWAGQAYENT AYNHYFTPNS RRYDCYFWVA QGFKAARSRH TGGVHTLMGD GGVRFTSENI DATIWRNIAT RSGSEVVSEF
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