Gene Plim_3982 details

Gene Information

• Locus tag: Plim_3982
• ID: 9140702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5108882
• End bp: 5109643
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 55%
• Product: cytochrome c family protein
• Protein accession: YP_003631992
• Protein GI: 296124214

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.520648
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCATGT CAACTTTGAG ACTTTCGGCC GCGCGAGTTG ATCCAATCGA ACCTATTGGC 
CGGTGCGAAG TAATGCAGAA GTTTCGCTTT CCTACATGGC TGGATCGTCT TCTCCCTGTC 
GTTGGGGGGC TCCTGGCATT CGGTGCGTTG TATGTGGGTG GAATGCTGTT TGTCGGGGCA 
AGTCCCTGGA CCATCGATGT TGGTTACCAG CCGACTCAAC CTGTTCCCTT CAGCCATGCC 
TTGCATGCCG GCAAGCTGAA GATGGATTGC CGGTACTGCC ATAACACGGT CGATCGCGCT 
GCCTTTGCTG CAGTGCCATC AACCGCCACC TGCATCAAAT GCCACCGCGG TGCTGATGAA 
AATGGCACGA TCACCACCAC AGCAGTGCGT TCGAAGAGCC CCAAACTGCT CCCCGTCCGT 
GAGAGCTATG CCTCGGGCAA CTCAGTCTTG TGGGTGAAGA TCCACGATCT GCCCGACTAT 
GCCTACTTCA ATCACAGTGC TCACGTTCGC CGAGGTGTGG CTTGTGTTTC TTGTCACGGC 
CGCATCGACA AAATGGAAGA AGTCCAGCAG AAAAAGCCCC TCTCGATGGC GTGGTGTCTG 
GAGTGTCATC GCAATCCAGA GCCAAACTTG AGGCCACCAG AACTGGTCAC ACAAATGGAC 
TGGGCTCCCC CAGAAGGTCA GTCGGCCGAG GCGATTGGAG CTGAGATTAA AAAGAATCTC 
CACATCCAGA CCAAGGAAAA CTGCTCGACC TGCCACCGAT AG 

 

Protein sequence

MPMSTLRLSA ARVDPIEPIG RCEVMQKFRF PTWLDRLLPV VGGLLAFGAL YVGGMLFVGA 
SPWTIDVGYQ PTQPVPFSHA LHAGKLKMDC RYCHNTVDRA AFAAVPSTAT CIKCHRGADE 
NGTITTTAVR SKSPKLLPVR ESYASGNSVL WVKIHDLPDY AYFNHSAHVR RGVACVSCHG 
RIDKMEEVQQ KKPLSMAWCL ECHRNPEPNL RPPELVTQMD WAPPEGQSAE AIGAEIKKNL 
HIQTKENCST CHR