Gene Plim_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3850 
Symbol 
ID9140568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4951863 
End bp4952894 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631861 
Protein GI296124083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGATA CGACTGCTCC AGCCTCACTT CCTGAAAAAG CGGCTCCAGT CGCGAAGCCT 
TTATGGCAAA AGATCCTCAA GTGGGTGCTT TTTGCAGTCG TGCTGGTTTA TGTCAGTCGG
CATCTCTGGC AAATGTGGCG CGATGGCCAG GCACATACCA TCACGGTGCA TTGGGGTTAT
GTCGTCATTG CGATCGGGCT CTTCACACTC AGTTGGACAC CTTCGATCTT TGTCTGGCGC
AAACTCCTCC GCTCGTGTCA TCAGGAGGCC GACTTGACGG TGATTGCCAA AGCCTTTTAC
ATCGGTCACT TTGGCAAGTA TGTTCCCGGC AAAGCCATGG CACTGGCTAT TCGCGGCTGG
CTCGCGCGCG ATGAAGCCGG TGTTCCCATG CGTATTGGTG TCTTGACCGC AGGCTACGAA
GCCATTGCCT TTATGGCCGC TGGTTCCTTT TGGGCGATGA TCTTTCTTCC CGTCGGTATG
AAACGTCTCC TGAATGAATG GCAGATCCCC GACTGGTTCT GGTGGCTGTG GCCTCTCTTG
ATAGTCACTT TGCTGCTCAT CTCACTGCCG GTTGTTGCGC AGCTCATGAA CCAGCTTTCA
CGAAAAATGG CCTCACAGAT CACCGATACG CCGCCATTAA CCATCGGACC GTGGCAGCTT
CTCGCACTTC TCGCACAGTT GAGCATCGCC TGGTTTATCA AAGCCATCGC CCTGGCCTGT
TTATGGGTGG GTGTCAGCTC GGCAGGGGCA GATCTCCCGA ACATGCCCAC CTGTCTGGCA
GCGGCCACTA TTGCGAATGT CGGCGGCTTT CTCGTCTTCT TTGCACCCGC TGGCCTGGGC
CCGCGCGAAT GGCTCATGAT CGAAGTCTTT TCTCAACCGG GCAGTCTGAG TTCCTCACAG
ATTGCTGTCA TCACCATTCT GGCCAGACTC GTCAGCTTTC TGGGAGAAGC CGTCGGAGCG
GTCATTTTCG CACTCGTCAG CCCTCGTCGG GCAGTCGTAC CAGAAGTGCA TGATTCAACC
CCCGCACCAT AA
 
Protein sequence
MSDTTAPASL PEKAAPVAKP LWQKILKWVL FAVVLVYVSR HLWQMWRDGQ AHTITVHWGY 
VVIAIGLFTL SWTPSIFVWR KLLRSCHQEA DLTVIAKAFY IGHFGKYVPG KAMALAIRGW
LARDEAGVPM RIGVLTAGYE AIAFMAAGSF WAMIFLPVGM KRLLNEWQIP DWFWWLWPLL
IVTLLLISLP VVAQLMNQLS RKMASQITDT PPLTIGPWQL LALLAQLSIA WFIKAIALAC
LWVGVSSAGA DLPNMPTCLA AATIANVGGF LVFFAPAGLG PREWLMIEVF SQPGSLSSSQ
IAVITILARL VSFLGEAVGA VIFALVSPRR AVVPEVHDST PAP