Gene Plim_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3829 
Symbol 
ID9140547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4923095 
End bp4924246 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631840 
Protein GI296124062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.353465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATACC TGAAGATTGC CGCAGGAGTC CTTTTTCCAC TGCTTGTTGT GATGTTGATT 
CTACCGGCAA TTCACCAATC CCGAGAAGCG GCTCGTCGCA CGCAGTGGCG GAATAACCTC
AAGCAGATTG GTCTGGCACT TCATAACTAT CATGATGTAT TTGACACATT CCCACCGGGA
GGTGTCTATA ACGCTGAGGG ACACGGCTAT TTTGGCTGGC CCGTCCCCTT GATTCCTTAC
CTGGCATGTA CTCCATTCTA CTATCGACTT GATCAGAATA TCCCCTGGGA TGATCCCCGG
CAGGTCGAAT GGTTTACAGA TCGTCATTGC CGGGAGAATA TTTCGTGGCT GGACCCCAGT
CTTGAGACAC CATCCTCCGC CAATGGCTAT CCACTGATTC ATGTCGCGGC CAACTCCTGG
GTCATGCATC GCAATAGTCA CGTGACGCTT GACGATCTTG GCACTTCGGC TCACACGCTT
CTCGCAGCCG ATGCTTCCGA GCCGTTTGAT ATTTTTGCTT CAACGACTGC CTGGCGCGAA
GTCAGCATAC CTCGAAACAC TTCTCCATTC GGCTTCAGCT CCCACGGTCG AGAGGTCACG
CATGGCCTCA TGGGTGATGG TTCTGTCAAA ACGGTCACTC TTGAAGCTGA TGAATCAATC
TGGCACGCCA TGCAAGGGCC GGAATCACTC AGGCCGGCAC CAGAATTGAC GGCCCGCGAA
CCTGGGATTC CGCCACCTTT AAGTAAGCCA TATGTAAAGC ATCTTTGGAG TAGTTTGTAT
GGTAAGAATA ACCCTGATCA GCGCGCTCGG CTATCCATCG ACGGCCAGAC TTTGACAGTC
TCGACGGCAG CAGGTGATAC TTCCCCTCCA GAAAAGCGAT ACGAACCCGC ATATCTGGGT
TGGTTAGTCA GTTTGGAAAA ACTTTGCCTG GAAGCCAGTA TCAAGCAGGT GATCGTCAAA
GGCACAGTGA CTGCCGAAGA AATACGCGTG ATCCTGCGGT CCCCGCATCT GGAGTCCATC
GACATCAACG GTGTCGAGAA TCCGGAGATC GTGCTTGTTG AGGTAAAGAG CACACCGCGA
AGAATTCAAG TTCTGAAGTC ATCGTCAACG ATTCAAGATA ACGATTCGCC GGACGAAAAT
ATAAACCGTT GA
 
Protein sequence
MRYLKIAAGV LFPLLVVMLI LPAIHQSREA ARRTQWRNNL KQIGLALHNY HDVFDTFPPG 
GVYNAEGHGY FGWPVPLIPY LACTPFYYRL DQNIPWDDPR QVEWFTDRHC RENISWLDPS
LETPSSANGY PLIHVAANSW VMHRNSHVTL DDLGTSAHTL LAADASEPFD IFASTTAWRE
VSIPRNTSPF GFSSHGREVT HGLMGDGSVK TVTLEADESI WHAMQGPESL RPAPELTARE
PGIPPPLSKP YVKHLWSSLY GKNNPDQRAR LSIDGQTLTV STAAGDTSPP EKRYEPAYLG
WLVSLEKLCL EASIKQVIVK GTVTAEEIRV ILRSPHLESI DINGVENPEI VLVEVKSTPR
RIQVLKSSST IQDNDSPDEN INR