Gene Plim_3787 details

Gene Information

• Locus tag: Plim_3787
• ID: 9140505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4865853
• End bp: 4867829
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 58%
• Product: hypothetical protein
• Protein accession: YP_003631798
• Protein GI: 296124020

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.791702
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTGA CACGCCGCCT GCTGCTGAAG ATTGCCCCTG TGGTTCTGTT GGGACAGTCT 
TGTATTTCCC GCGCTTTTGC TGCTGCCGTG CCACCGTTTG GAGAGAAGTA TCCCAACCTG 
GAATCGCTGA CGACCGGCGA GTGGTGGAAC AAAGGGGCGC TGGCGGCAAC GCCGAATGCG 
AACAAGAACG CCAAGGGCAA AACCAAAGCG GCTGGCGGTC CGGCGGCACC GCCTTCGATG 
AATGTGCCGC GAGATGAGGT GGTCTGCTTC GCGTATTACA CGCAGCAGAA TGGCGTGCTG 
AAGCTGAGTG CCCAGCTCTT TCCACTAAAG CCCGATGAAG AGCGTGTGGC CAGGCTCGAA 
GTCCGACCCG CAGGCGAAGA CTGGAAGGAG ATCGCCAGAA CTGAGGTGCT TTATCCGGGT 
TGGGATGCCC ATTTTCGCGT CGAGGGCTGG GATGGTTCAA AGAACGTTCC CTATCGAGTG 
CGTCACGGCG AGAAGGCCAT GTTTGAAGGC CTCATCCGTC GCGATCCTGT CGAGAAAGAG 
GTGATCGTTG TCGCCAACAT GAGCTGTAAC AGCAGTCGCA CCATCGGACC ACGCACAGAG 
ATTGTCGATA ACCTCCGCGC TCAGGATCCT GATGTTCTTT TCTTCGGTGG TGATCAGACC 
TATCGCCACA CCGAACACAC TGCCGGCTGG ATTGAATTCG GCTTGCAGTT CCGCGACATC 
ATCCGCGACC GGCCCACGGT CTGCATTCCC GACGATCACG ATGTCGGCCA TCCGAATCTC 
TGGGGCGAAG AAGGTGGTCA ATCGCACATC GAAGGCGATG CGGACGGAGG CTATCGGTAC 
CCGGTCGCAT ACGTCAATCA GGTCCAGCGG CAGCAATCAT GGCATCTGCC CGATGCACCC 
GATCCCGCGC CAGTCAACCG GGATATTTCG GTCTATTTCA CGCGAATGAC TGTCGGTGGC 
ATCGACTTTG CCATTCTCGA AGATCGAAAG TTCAAGACCG GTCCTGCTGG AATGATCCCG 
CAGATGGGAC CGCGTCCTGA CCATATCAAT GATCCCTCGT ATGACCCGAA GAGTATTGAC 
CTGCCTGGTC TCGAACTGCT CGGCCCGCGA CAGGAGAAGT TCCTGCACGA GTGGTCGCAG 
GATTACAGCG GCGGTGCCGA GATGAAATGT GTTCTTTCTG CGACCGCCTT TTGCGGAGCG 
GTCCATATGC ATGGCGGACC GAACAGCCGA CTGCTGGCCG ATCTCGACTG CAATGGCTGG 
CCGCAAAGTG GTCGCAATCG TGCTCTCCGG GAGATTCGTC GCGCGTGGGC TCCGCATCTC 
TGTGGCGACC AGCATCTGGC GGTCGTCGTC AAGCATGGTA TTGAGACGTT CGGCGACGGC 
CCGTTTGGTT TCACCAGTCC CGCCCTTGTG AACACAATCT ATGGTCGCTG GTGGCATCCG 
CTGGATGAGC AGGCCGGGCC GAATCCCGTT CCGAACAGCC CATTGCCCTG GACTGGTGAT 
TTCAAAGATG GACTTGGCAA TCCGATCAGC ATGCTGGCCT ACGCCAACCC CGAGAACATT 
CAGAACGAAC AGCAAAGGGC CGATGGCTAC GGCCTGATCC GTTTCGACAA GAAGTCGCGA 
AAGATTACGT TCGAGTGCTG GCCGCGGTTT TCAAAGGTCA GCGAAGGAGA CAAAGCCCAG 
TTCCCCGGCT GGCCAGTGAC CATTGCGCTC GATGCTAACG ATGGTCGCGC GATTCAAGGC 
TGGCTGCCGG AACTGATCTT CGAAGGGGTT GAGAATCCTG TGGTTCAGGT GATCGAGGAA 
GCGACTGGAG ATATTCTTTA CGCAGTCCGC GTGCAGGGAA CCCGCTTCCA GCCACGGGTC 
TATTCGACTG GTAAGCATAC GGTCAAAGTG GGCCGGGACC GACCGGACGC TCAGTCGATG 
GAAGGCCTGG AGCCTCGGCC AAAGGACATG GCCGGAAGTC GCCAGGTCAA ATTCTGA 

 

Protein sequence

MKLTRRLLLK IAPVVLLGQS CISRAFAAAV PPFGEKYPNL ESLTTGEWWN KGALAATPNA 
NKNAKGKTKA AGGPAAPPSM NVPRDEVVCF AYYTQQNGVL KLSAQLFPLK PDEERVARLE 
VRPAGEDWKE IARTEVLYPG WDAHFRVEGW DGSKNVPYRV RHGEKAMFEG LIRRDPVEKE 
VIVVANMSCN SSRTIGPRTE IVDNLRAQDP DVLFFGGDQT YRHTEHTAGW IEFGLQFRDI 
IRDRPTVCIP DDHDVGHPNL WGEEGGQSHI EGDADGGYRY PVAYVNQVQR QQSWHLPDAP 
DPAPVNRDIS VYFTRMTVGG IDFAILEDRK FKTGPAGMIP QMGPRPDHIN DPSYDPKSID 
LPGLELLGPR QEKFLHEWSQ DYSGGAEMKC VLSATAFCGA VHMHGGPNSR LLADLDCNGW 
PQSGRNRALR EIRRAWAPHL CGDQHLAVVV KHGIETFGDG PFGFTSPALV NTIYGRWWHP 
LDEQAGPNPV PNSPLPWTGD FKDGLGNPIS MLAYANPENI QNEQQRADGY GLIRFDKKSR 
KITFECWPRF SKVSEGDKAQ FPGWPVTIAL DANDGRAIQG WLPELIFEGV ENPVVQVIEE 
ATGDILYAVR VQGTRFQPRV YSTGKHTVKV GRDRPDAQSM EGLEPRPKDM AGSRQVKF