| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3744 |
|---|
| Symbol | |
|---|
| ID | 9140462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4815370 |
|---|
| End bp | 4816209 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | RDD domain containing protein |
|---|
| Protein accession | YP_003631755 |
|---|
| Protein GI | 296123977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCTG AAGTCAGTTT GAATGTTCGT ATCGAGACGC CGGAAAATGT CCGGCTCGCC
TACCAACTGG CAGGCCCAGC CCTGCGCAGT GCGGCCTACG CCATCGACTG CCTCTTCCGC
GTGTTGCTCA TCACAGCACT TCTGATCGGT GCCTGTCTAA TGGCTGCCAT CCTGCCCGGG
TTCACAATTG GTGGCATCCT GCTGGCACTC TTCTTTATCG AGTGGCTGTA CTACATCGTT
CAGGAAGGCT TCTGGAATGG CTATTCGATG GGCAAATGGC TGGTAGGGAT CCGGGTGATT
CATACCTCGG GAGCACCACT CACCTTCTGG GGGGCTGTTC TGCGGAATCT TTTACGTGTG
GCCGACATGC TGCCTATTGC CATGGTGTTT GAGGATGTGG CCTGGCTCGG AATTCTCCCT
TTCTATGGCC CGGGGCTTCT GGCCATGTCG ATGACCCAAA AGTTCCAAAG GCTGGGCGAT
CTCGCTGCGG GAACAATGGT CGTGCAGGTT CACCCGATTG TCCTGCCGAA ACAACCGATG
ATCCTCGACC ATATTGCCCC GATCACCCGG TACGAATCGA ATGGCTTTAC CCCCACTCAG
GCGCAATTGT CGACGATTGC CGAGTTTCTC GGGCGACGTT CCAAACTGAC TTATCAGCGG
GGGCATCAGC TGGCTTCCGA ACTGGCGGAT ACTCTGGCAG AGCGGATGGA ATTCACCGGT
GACCGCGAAC AGGTGCGCAA GTTCCCGATG GCCTTTCTCG CCCGGGTCTG TGCTACATTT
CAAACCGCAC GAGATGAGAA AGCGGCCGTC ATCACGCCTG CGAAAGCGAG GCTCATGTGA
|
|---|
| Protein sequence | MAAEVSLNVR IETPENVRLA YQLAGPALRS AAYAIDCLFR VLLITALLIG ACLMAAILPG
FTIGGILLAL FFIEWLYYIV QEGFWNGYSM GKWLVGIRVI HTSGAPLTFW GAVLRNLLRV
ADMLPIAMVF EDVAWLGILP FYGPGLLAMS MTQKFQRLGD LAAGTMVVQV HPIVLPKQPM
ILDHIAPITR YESNGFTPTQ AQLSTIAEFL GRRSKLTYQR GHQLASELAD TLAERMEFTG
DREQVRKFPM AFLARVCATF QTARDEKAAV ITPAKARLM
|
|---|
| |